RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 MFSD1Q9H3U5 465 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 CDH9Q9ULB4 789 aa29.16■■■□□ 2.26
SMAD4-213ENST00000591914 MUC6Q6W4X9 2439 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 A0A1W2PRU2 124 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 MYBPHLA2RUH7 354 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 VNN1O95497 513 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 AVPR2P30518 371 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 TNNC1P63316 161 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 GPC5P78333 572 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 NCOA4Q13772 614 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 EDRF1Q3B7T1 1238 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 ZACNQ401N2 412 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 CFAP221Q4G0U5 840 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 C1orf220Q5T0J3 134 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 TANGO2Q6ICL3 276 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 FAM200AQ8TCP9 573 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 ERCC4Q92889 916 aaPredicted RBP29.15■■■□□ 2.26
SMAD4-213ENST00000591914 SMARCE1Q969G3 411 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 SYT15Q9BQS2 421 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 MRPL45Q9BRJ2 306 aaKnown RBP29.15■■■□□ 2.26
SMAD4-213ENST00000591914 GPR88Q9GZN0 384 aa29.15■■■□□ 2.26
SMAD4-213ENST00000591914 KRBA1A5PL33 1030 aa29.14■■■□□ 2.26
SMAD4-213ENST00000591914 ATP2C2O75185 946 aa29.14■■■□□ 2.26
SMAD4-213ENST00000591914 GADD45BO75293 160 aaPredicted RBP29.14■■■□□ 2.26
SMAD4-213ENST00000591914 NPR3P17342 541 aa29.14■■■□□ 2.26
SMAD4-213ENST00000591914 PRCPP42785 496 aa29.14■■■□□ 2.26
SMAD4-213ENST00000591914 ADAM9Q13443 819 aa29.14■■■□□ 2.26
SMAD4-213ENST00000591914 GIPC2Q8TF65 315 aa29.14■■■□□ 2.26
SMAD4-213ENST00000591914 SMARCD2Q92925 531 aa29.14■■■□□ 2.26
SMAD4-213ENST00000591914 FUBP3Q96I24 572 aaKnown RBP eCLIP29.14■■■□□ 2.26
SMAD4-213ENST00000591914 PLA2G2FQ9BZM2 168 aa29.14■■■□□ 2.26
SMAD4-213ENST00000591914 TRPV4Q9HBA0 871 aa29.14■■■□□ 2.26
SMAD4-213ENST00000591914 CHMP5Q9NZZ3 219 aa29.14■■■□□ 2.26
SMAD4-213ENST00000591914 CYP2F1P24903 491 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 VAMP7P51809 220 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 ENPEPQ07075 957 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 ZNF699Q32M78 642 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 IER5LQ5T953 404 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 CWF19L1Q69YN2 538 aaKnown RBP29.13■■■□□ 2.25
SMAD4-213ENST00000591914 ASTLQ6HA08 431 aaPredicted RBP29.13■■■□□ 2.25
SMAD4-213ENST00000591914 INTS8Q75QN2 995 aaKnown RBP29.13■■■□□ 2.25
SMAD4-213ENST00000591914 FAM186BQ8IYM0 893 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 GTPBP4Q9BZE4 634 aaKnown RBP29.13■■■□□ 2.25
SMAD4-213ENST00000591914 SNX25Q9H3E2 840 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 IL21Q9HBE4 155 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 ZFP14Q9HCL3 533 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 CRTAC1Q9NQ79 661 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 NXF1Q9UBU9 619 aaKnown RBP29.13■■■□□ 2.25
SMAD4-213ENST00000591914 NME7Q9Y5B8 376 aa29.13■■■□□ 2.25
SMAD4-213ENST00000591914 KINO60870 393 aaKnown RBP29.12■■■□□ 2.25
SMAD4-213ENST00000591914 PDGFRBP09619 1106 aa29.12■■■□□ 2.25
SMAD4-213ENST00000591914 GABRR2P28476 465 aa29.12■■■□□ 2.25
SMAD4-213ENST00000591914 PSMC2P35998 433 aaKnown RBP29.12■■■□□ 2.25
SMAD4-213ENST00000591914 GNL1P36915 607 aaPredicted RBP29.12■■■□□ 2.25
SMAD4-213ENST00000591914 GPR15P49685 360 aa29.12■■■□□ 2.25
SMAD4-213ENST00000591914 CLCN5P51795 746 aa29.12■■■□□ 2.25
SMAD4-213ENST00000591914 MCCD1P59942 119 aaPredicted RBP29.12■■■□□ 2.25
SMAD4-213ENST00000591914 PSMC1P62191 440 aaKnown RBP29.12■■■□□ 2.25
SMAD4-213ENST00000591914 MAPRE1Q15691 268 aaKnown RBP29.12■■■□□ 2.25
SMAD4-213ENST00000591914 SV2AQ7L0J3 742 aa29.12■■■□□ 2.25
SMAD4-213ENST00000591914 SPATA2LQ8IUW3 424 aaPredicted RBP29.12■■■□□ 2.25
SMAD4-213ENST00000591914 ZSCAN18Q8TBC5 510 aaPredicted RBP29.12■■■□□ 2.25
SMAD4-213ENST00000591914 CA14Q9ULX7 337 aa29.12■■■□□ 2.25
SMAD4-213ENST00000591914 HMGA1P17096 107 aaKnown RBP29.11■■■□□ 2.25
SMAD4-213ENST00000591914 RPL10AP62906 217 aaKnown RBP29.11■■■□□ 2.25
SMAD4-213ENST00000591914 STXBP5Q5T5C0 1151 aa29.11■■■□□ 2.25
SMAD4-213ENST00000591914 C4orf50Q6ZRC1 276 aa29.11■■■□□ 2.25
SMAD4-213ENST00000591914 TMEM105Q8N8V8 129 aa29.11■■■□□ 2.25
SMAD4-213ENST00000591914 FLCNQ8NFG4 579 aa29.11■■■□□ 2.25
SMAD4-213ENST00000591914 MKNK1Q9BUB5 465 aa29.11■■■□□ 2.25
SMAD4-213ENST00000591914 SLITRK6Q9H5Y7 841 aa29.11■■■□□ 2.25
SMAD4-213ENST00000591914 ARHGEF3Q9NR81 526 aa29.11■■■□□ 2.25
SMAD4-213ENST00000591914 CDC25CP30307 473 aa29.1■■■□□ 2.25
SMAD4-213ENST00000591914 MAGEA11P43364 429 aa29.1■■■□□ 2.25
SMAD4-213ENST00000591914 TAF12Q16514 161 aa29.1■■■□□ 2.25
SMAD4-213ENST00000591914 DDR2Q16832 855 aa29.1■■■□□ 2.25
SMAD4-213ENST00000591914 ZNF667Q5HYK9 610 aa29.1■■■□□ 2.25
SMAD4-213ENST00000591914 OR6B3Q8NGW1 331 aa29.1■■■□□ 2.25
SMAD4-213ENST00000591914 MYLPFQ96A32 169 aa29.1■■■□□ 2.25
SMAD4-213ENST00000591914 ATXN3LQ9H3M9 355 aa29.1■■■□□ 2.25
SMAD4-213ENST00000591914 KRT13P13646 458 aa29.09■■■□□ 2.25
SMAD4-213ENST00000591914 ANP32AP39687 249 aaKnown RBP29.09■■■□□ 2.25
SMAD4-213ENST00000591914 PFKPQ01813 784 aa29.09■■■□□ 2.25
SMAD4-213ENST00000591914 SGSM1Q2NKQ1 1148 aa29.09■■■□□ 2.25
SMAD4-213ENST00000591914 ADSSL1Q8N142 457 aa29.09■■■□□ 2.25
SMAD4-213ENST00000591914 MYCBPAPQ8TBZ2 947 aa29.09■■■□□ 2.25
SMAD4-213ENST00000591914 TAF4BQ92750 862 aa29.09■■■□□ 2.25
SMAD4-213ENST00000591914 PRRX2Q99811 253 aa29.09■■■□□ 2.25
SMAD4-213ENST00000591914 SMYD3Q9H7B4 428 aa29.09■■■□□ 2.25
SMAD4-213ENST00000591914 TRIM49P0CI25 452 aa29.08■■■□□ 2.25
SMAD4-213ENST00000591914 TRIM49CP0CI26 452 aa29.08■■■□□ 2.25
SMAD4-213ENST00000591914 CSH1P0DML2 217 aa29.08■■■□□ 2.25
SMAD4-213ENST00000591914 CSH2P0DML3 217 aa29.08■■■□□ 2.25
SMAD4-213ENST00000591914 AOC1P19801 751 aa29.08■■■□□ 2.25
SMAD4-213ENST00000591914 VIPR2P41587 438 aa29.08■■■□□ 2.25
SMAD4-213ENST00000591914 NUBP1P53384 320 aa29.08■■■□□ 2.25
SMAD4-213ENST00000591914 PPP3CAQ08209 521 aa29.08■■■□□ 2.25
SMAD4-213ENST00000591914 ARHGAP15Q53QZ3 475 aa29.08■■■□□ 2.25
SMAD4-213ENST00000591914 SDHAF4Q5VUM1 108 aa29.08■■■□□ 2.25
SMAD4-213ENST00000591914 VITQ6UXI7 678 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms