RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 MYL1P05976 194 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 PSMC1P62191 440 aaKnown RBP21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 DLG4P78352 724 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 CYP4F8P98187 520 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 TRPC3Q13507 836 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 VEPH1Q14D04 833 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 MLF2Q15773 248 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 NFE2Q16621 373 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 GPR158Q5T848 1215 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 VITQ6UXI7 678 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 DPH6Q7L8W6 267 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 LIMS2Q7Z4I7 341 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 DTWD2Q8NBA8 298 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 CCDC47Q96A33 483 aaKnown RBP21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 IL21Q9HBE4 155 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 MTF2Q9Y483 593 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 NME7Q9Y5B8 376 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 NCANO14594 1321 aa21.48■■□□□ 1.03
TRAPPC6A-203ENST00000587818 LRRIQ3A6PVS8 624 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 HEPACAM2A8MVW5 462 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 RHOBTB3O94955 611 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 GDI1P31150 447 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 STARD6P59095 220 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 WDR72Q3MJ13 1102 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 CEP135Q66GS9 1140 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 PHLDB3Q6NSJ2 640 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 ARID3BQ8IVW6 561 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 PARD3BQ8TEW8 1205 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 MKNK1Q9BUB5 465 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 TRMT61BQ9BVS5 477 aaKnown RBP21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 GPR88Q9GZN0 384 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 BRD9Q9H8M2 597 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 HEBP1Q9NRV9 189 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 NXF1Q9UBU9 619 aaKnown RBP21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 MAGED2Q9UNF1 606 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 SIT1Q9Y3P8 196 aa21.47■■□□□ 1.03
TRAPPC6A-203ENST00000587818 HMGA1P17096 107 aaKnown RBP21.46■■□□□ 1.03
TRAPPC6A-203ENST00000587818 HOXD11P31277 338 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC6A-203ENST00000587818 PFKPQ01813 784 aa21.46■■□□□ 1.03
TRAPPC6A-203ENST00000587818 BIRC3Q13489 604 aa21.46■■□□□ 1.03
TRAPPC6A-203ENST00000587818 PNOCQ13519 176 aa21.46■■□□□ 1.03
TRAPPC6A-203ENST00000587818 SPATA2LQ8IUW3 424 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC6A-203ENST00000587818 SLC9A9Q8IVB4 645 aa21.46■■□□□ 1.03
TRAPPC6A-203ENST00000587818 SCN4BQ8IWT1 228 aa21.46■■□□□ 1.03
TRAPPC6A-203ENST00000587818 SYT15Q9BQS2 421 aa21.46■■□□□ 1.03
TRAPPC6A-203ENST00000587818 CRTAC1Q9NQ79 661 aa21.46■■□□□ 1.03
TRAPPC6A-203ENST00000587818 GOLGA6L4A6NEF3 574 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CALUO43852 315 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 C4BPAP04003 597 aaKnown RBP21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 PSMC3P17980 439 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 WARSP23381 471 aaKnown RBP21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 PCSK1P29120 753 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 GNL1P36915 607 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 NUBP1P53384 320 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TDRD10Q5VZ19 366 aaKnown RBP21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 FAM171BQ6P995 826 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CCDC105Q8IYK2 499 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SMYD4Q8IYR2 804 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 FMR1NBQ8N0W7 255 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 OR6B3Q8NGW1 331 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ERCC4Q92889 916 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SHDQ96IW2 340 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 LRRC3BQ96PB8 259 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SMG9Q9H0W8 520 aaKnown RBP21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SNX25Q9H3E2 840 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TRPV4Q9HBA0 871 aa21.45■■□□□ 1.02
TRAPPC6A-203ENST00000587818 FAM170BA6NMN3 283 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CLSTN1O94985 981 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 F11P03951 625 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 GLULP15104 373 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 MRE11P49959 708 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CDH8P55286 799 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 PRKCQQ04759 706 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 UBXN2BQ14CS0 331 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 ARHGAP15Q53QZ3 475 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TPRG1Q6ZUI0 275 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TMEM150AQ86TG1 271 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 MFSD6LQ8IWD5 586 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SPATA18Q8TC71 538 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SLC46A2Q9BY10 475 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 XYLT2Q9H1B5 865 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TASP1Q9H6P5 420 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 MAGEC2Q9UBF1 373 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 CDH9Q9ULB4 789 aa21.44■■□□□ 1.02
TRAPPC6A-203ENST00000587818 KANSL1LA0AUZ9 987 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SLC38A8A6NNN8 435 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 VNN1O95497 513 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 FGF19O95750 216 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 NLRP12P59046 1061 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 RPL10AP62906 217 aaKnown RBP21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TNNC1P63316 161 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 KCNB1Q14721 858 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 PJA1Q8NG27 643 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 MYLPFQ96A32 169 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 DDX23Q9BUQ8 820 aaKnown RBP21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 DPEP3Q9H4B8 488 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 TRAF3IP3Q9Y228 551 aa21.43■■□□□ 1.02
TRAPPC6A-203ENST00000587818 SHISA7A6NL88 538 aa21.42■■□□□ 1.02
TRAPPC6A-203ENST00000587818 DPYSL4O14531 572 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms