RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 PLCB3Q01970 1234 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 LEXMQ3ZCV2 418 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 SGO2Q562F6 1265 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 VARS2Q5ST30 1063 aaKnown RBP18■□□□□ 0.47
HMG20B-215ENST00000585741 ACOT1Q86TX2 421 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 UBR7Q8N806 425 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 BCL7CQ8WUZ0 217 aaPredicted RBP18■□□□□ 0.47
HMG20B-215ENST00000585741 RIN2Q8WYP3 895 aaPredicted RBP18■□□□□ 0.47
HMG20B-215ENST00000585741 PPP1R9BQ96SB3 815 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 SYT15Q9BQS2 421 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 HERC2P3Q9BVR0 1158 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 GPR88Q9GZN0 384 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 CDH9Q9ULB4 789 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 KIAA1257Q9ULG3 409 aa18■□□□□ 0.47
HMG20B-215ENST00000585741 COL4A6Q14031 1691 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 C2CD2LO14523 706 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 GABRDO14764 452 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 VDRP11473 427 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 ACAT1P24752 427 aaKnown RBP17.99■□□□□ 0.47
HMG20B-215ENST00000585741 LMO2P25791 158 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 RAD23BP54727 409 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 CREMQ03060 361 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 ORC1Q13415 861 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 MAPRE1Q15691 268 aaKnown RBP17.99■□□□□ 0.47
HMG20B-215ENST00000585741 CYP26C1Q6V0L0 522 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 TMC7Q7Z402 723 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 LIMS2Q7Z4I7 341 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 OSTM1Q86WC4 334 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 DCP1BQ8IZD4 617 aaKnown RBP17.99■□□□□ 0.47
HMG20B-215ENST00000585741 CCDC112Q8NEF3 446 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 FBXO22Q8NEZ5 403 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 B3GALT6Q96L58 329 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 BAG1Q99933 345 aaPredicted RBP17.99■□□□□ 0.47
HMG20B-215ENST00000585741 ACBD6Q9BR61 282 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.99■□□□□ 0.47
HMG20B-215ENST00000585741 ELOVL4Q9GZR5 314 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 MRPL17Q9NRX2 175 aaKnown RBP17.99■□□□□ 0.47
HMG20B-215ENST00000585741 CNTN6Q9UQ52 1028 aa17.99■□□□□ 0.47
HMG20B-215ENST00000585741 OR6C75A6NL08 312 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 PI4K2BG5E9Z4 385 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 GPR37L1O60883 481 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 OAZ2O95190 189 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 SKILP12757 684 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 CPB1P15086 417 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 CYP11B1P15538 503 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 PTPN1P18031 435 aaKnown RBP17.98■□□□□ 0.47
HMG20B-215ENST00000585741 TNFAIP3P21580 790 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 CLCN1P35523 988 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 ARPP19P56211 112 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 PSMC1P62191 440 aaKnown RBP17.98■□□□□ 0.47
HMG20B-215ENST00000585741 STILQ15468 1287 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 PSMD5Q16401 504 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 TAF3Q5VWG9 929 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 SLC47A2Q86VL8 602 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 ZNF677Q86XU0 584 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 TMTC1Q8IUR5 882 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 SLC4A11Q8NBS3 891 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 MICAL1Q8TDZ2 1067 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 TRIM44Q96DX7 344 aaPredicted RBP17.98■□□□□ 0.47
HMG20B-215ENST00000585741 FAM122AQ96E09 287 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 CCDC42Q96M95 316 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 MED10Q9BTT4 135 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 HAUS4Q9H6D7 363 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 ENTPD7Q9NQZ7 604 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 HESX1Q9UBX0 185 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 HMGXB4Q9UGU5 601 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 LZTS1Q9Y250 596 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 ARIH1Q9Y4X5 557 aaPredicted RBP17.98■□□□□ 0.47
HMG20B-215ENST00000585741 CEP83Q9Y592 693 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 ATP8B3O60423 1300 aa17.98■□□□□ 0.47
HMG20B-215ENST00000585741 IPO7O95373 1038 aaKnown RBP17.97■□□□□ 0.47
HMG20B-215ENST00000585741 LINC00271P0C7V0 271 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 HNRNPH3P31942 346 aaKnown RBP17.97■□□□□ 0.47
HMG20B-215ENST00000585741 ZNF132P52740 706 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 SLC8A3P57103 927 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 UBE3AQ05086 875 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 ARID5BQ14865 1188 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 COL19A1Q14993 1142 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 TMEM31Q5JXX7 168 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 RTP2Q5QGT7 225 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 TAS1R1Q7RTX1 841 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 IRF2BP2Q7Z5L9 587 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 LRRC8AQ8IWT6 810 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 CRYBG2Q8N1P7 616 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 B3GALNT2Q8NCR0 500 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 WHAMMQ8TF30 809 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 PIK3R5Q8WYR1 880 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 MRPL38Q96DV4 380 aaKnown RBP17.97■□□□□ 0.47
HMG20B-215ENST00000585741 TWNKQ96RR1 684 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 DPEP3Q9H4B8 488 aa17.97■□□□□ 0.47
HMG20B-215ENST00000585741 ALG13Q9NP73 1137 aaKnown RBP17.97■□□□□ 0.47
HMG20B-215ENST00000585741 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.97■□□□□ 0.47
HMG20B-215ENST00000585741 C5orf67F2Z3F1 127 aa17.96■□□□□ 0.47
HMG20B-215ENST00000585741 H3BNC9 293 aa17.96■□□□□ 0.47
HMG20B-215ENST00000585741 AKR1B10O60218 316 aa17.96■□□□□ 0.47
HMG20B-215ENST00000585741 CSPG5O95196 566 aa17.96■□□□□ 0.47
HMG20B-215ENST00000585741 IL9P15248 144 aa17.96■□□□□ 0.47
HMG20B-215ENST00000585741 KCNA5P22460 613 aa17.96■□□□□ 0.47
HMG20B-215ENST00000585741 BRD2P25440 801 aaKnown RBP17.96■□□□□ 0.47
HMG20B-215ENST00000585741 HOXD11P31277 338 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms