RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PCDHB5Q9Y5E4 795 aa15.6■□□□□ 0.09
SDF2-202ENST00000585428 IL18RAPO95256 599 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 CSH1P0DML2 217 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 CSH2P0DML3 217 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 AVPR1AP37288 418 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 LIMK1P53667 647 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 WNT7BP56706 349 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 KCNA1Q09470 495 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 ZNF268Q14587 947 aaPredicted RBP15.59■□□□□ 0.09
SDF2-202ENST00000585428 SF3A1Q15459 793 aaKnown RBP15.59■□□□□ 0.09
SDF2-202ENST00000585428 SV2CQ496J9 727 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 TRIM68Q6AZZ1 485 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 USP49Q70CQ1 688 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 CACNA2D4Q7Z3S7 1137 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 CAMKK1Q8N5S9 505 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 POMGNT1Q8WZA1 660 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 HVCN1Q96D96 273 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 EPSTI1Q96J88 318 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 ZC3H10Q96K80 434 aaKnown RBP15.59■□□□□ 0.09
SDF2-202ENST00000585428 MYRFLQ96LU7 910 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 ACBD6Q9BR61 282 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 ARRDC1-AS1Q9H2J1 176 aa15.59■□□□□ 0.09
SDF2-202ENST00000585428 PRPF40AO75400 957 aaKnown RBP15.58■□□□□ 0.08
SDF2-202ENST00000585428 PNPLA4P41247 253 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 PXNP49023 591 aaPredicted RBP15.58■□□□□ 0.08
SDF2-202ENST00000585428 GPR15P49685 360 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 AMPD2Q01433 879 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 NFE2Q16621 373 aaPredicted RBP15.58■□□□□ 0.08
SDF2-202ENST00000585428 PLA2G2CQ5R387 149 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 DYMQ7RTS9 669 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 BRAPQ7Z569 592 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 KBTBD6Q86V97 674 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 SFR1Q86XK3 245 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 PDCL2Q8N4E4 241 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 ZSWIM2Q8NEG5 633 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 LEO1Q8WVC0 666 aaPredicted RBP15.58■□□□□ 0.08
SDF2-202ENST00000585428 DDX1Q92499 740 aaKnown RBP15.58■□□□□ 0.08
SDF2-202ENST00000585428 DNAJC19Q96DA6 116 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 PKMYT1Q99640 499 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 PI4K2AQ9BTU6 479 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 KIF9Q9HAQ2 790 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 ABCB6Q9NP58 842 aa15.58■□□□□ 0.08
SDF2-202ENST00000585428 RPP40O75818 363 aaKnown RBP15.57■□□□□ 0.08
SDF2-202ENST00000585428 EGFP01133 1207 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 ARSAP15289 507 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 DRD1P21728 446 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 CYP2F1P24903 491 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 BFSP1Q12934 665 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 SF3A2Q15428 464 aaKnown RBP15.57■□□□□ 0.08
SDF2-202ENST00000585428 DDR2Q16832 855 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 C1orf127Q8N9H9 656 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 MRPS31Q92665 395 aaKnown RBP15.57■□□□□ 0.08
SDF2-202ENST00000585428 TRMT2BQ96GJ1 504 aaKnown RBP15.57■□□□□ 0.08
SDF2-202ENST00000585428 CYP2S1Q96SQ9 504 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 FAM213AQ9BRX8 229 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 RXFP3Q9NSD7 469 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 POLR3BQ9NW08 1133 aaPredicted RBP15.57■□□□□ 0.08
SDF2-202ENST00000585428 GDAP2Q9NXN4 497 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 SEL1LQ9UBV2 794 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 GTF3C4Q9UKN8 822 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 L1RE1Q9UN81 338 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 AGAP1Q9UPQ3 857 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 SLC8A2Q9UPR5 921 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 SMC3Q9UQE7 1217 aa15.57■□□□□ 0.08
SDF2-202ENST00000585428 MYMKA6NI61 221 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 GABRDO14764 452 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 TADA3O75528 432 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 AKAP3O75969 853 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 NOL4O94818 638 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 EPN2O95208 641 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 GJA4P35212 333 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 RPL10AP62906 217 aaKnown RBP15.56■□□□□ 0.08
SDF2-202ENST00000585428 TFAMQ00059 246 aaKnown RBP15.56■□□□□ 0.08
SDF2-202ENST00000585428 TSPY1Q01534 308 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 PDGFRLQ15198 375 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 FBXO43Q4G163 708 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 L1TD1Q5T7N2 865 aaKnown RBP15.56■□□□□ 0.08
SDF2-202ENST00000585428 SDHAF4Q5VUM1 108 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 CC2D1AQ6P1N0 951 aaPredicted RBP15.56■□□□□ 0.08
SDF2-202ENST00000585428 TMEM86AQ8N2M4 240 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 CSGALNACT2Q8N6G5 542 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 LRRC52Q8N7C0 313 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 STKLD1Q8NE28 680 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 RASSF8Q8NHQ8 419 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 CACTINQ8WUQ7 758 aaKnown RBP15.56■□□□□ 0.08
SDF2-202ENST00000585428 EZH1Q92800 747 aaPredicted RBP15.56■□□□□ 0.08
SDF2-202ENST00000585428 ZNF560Q96MR9 790 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 SLC22A12Q96S37 553 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 P2RY13Q9BPV8 354 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 ECT2Q9H8V3 914 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 MRPL44Q9H9J2 332 aaKnown RBP15.56■□□□□ 0.08
SDF2-202ENST00000585428 DDX43Q9NXZ2 648 aaKnown RBP15.56■□□□□ 0.08
SDF2-202ENST00000585428 STK17AQ9UEE5 414 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 MAGED2Q9UNF1 606 aaPredicted RBP15.56■□□□□ 0.08
SDF2-202ENST00000585428 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.56■□□□□ 0.08
SDF2-202ENST00000585428 CLIC4Q9Y696 253 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 MYH11P35749 1972 aa15.56■□□□□ 0.08
SDF2-202ENST00000585428 HUS1O60921 280 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 RNF40O75150 1001 aa15.55■□□□□ 0.08
SDF2-202ENST00000585428 LDHAP00338 332 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms