RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 NXF1Q9UBU9 619 aaKnown RBP21.87■■□□□ 1.09
SS18-224ENST00000584083 HOOK1Q9UJC3 728 aaKnown RBP21.87■■□□□ 1.09
SS18-224ENST00000584083 CDH9Q9ULB4 789 aa21.87■■□□□ 1.09
SS18-224ENST00000584083 CIZ1Q9ULV3 898 aaPredicted RBP21.87■■□□□ 1.09
SS18-224ENST00000584083 MYBPHLA2RUH7 354 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 ATP2C2O75185 946 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 SMC2O95347 1197 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 WARSP23381 471 aaKnown RBP21.86■■□□□ 1.09
SS18-224ENST00000584083 FCARP24071 287 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 CYP2F1P24903 491 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 LMO2P25791 158 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 RPL13P26373 211 aaKnown RBP21.86■■□□□ 1.09
SS18-224ENST00000584083 ATICP31939 592 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 RPL10AP62906 217 aaKnown RBP21.86■■□□□ 1.09
SS18-224ENST00000584083 DLG4P78352 724 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 CLDN10P78369 228 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 PFKPQ01813 784 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 TDRD10Q5VZ19 366 aaKnown RBP21.86■■□□□ 1.09
SS18-224ENST00000584083 CWF19L1Q69YN2 538 aaKnown RBP21.86■■□□□ 1.09
SS18-224ENST00000584083 GAREM2Q75VX8 874 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 SMYD4Q8IYR2 804 aaPredicted RBP21.86■■□□□ 1.09
SS18-224ENST00000584083 TMC2Q8TDI7 906 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 GCNAQ96QF7 691 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 PKMYT1Q99640 499 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 MRPL45Q9BRJ2 306 aaKnown RBP21.86■■□□□ 1.09
SS18-224ENST00000584083 ABCB6Q9NP58 842 aa21.86■■□□□ 1.09
SS18-224ENST00000584083 STAU1O95793 577 aaKnown RBP21.85■■□□□ 1.09
SS18-224ENST00000584083 C4BPAP04003 597 aaKnown RBP21.85■■□□□ 1.09
SS18-224ENST00000584083 GNL1P36915 607 aaPredicted RBP21.85■■□□□ 1.09
SS18-224ENST00000584083 GPR15P49685 360 aa21.85■■□□□ 1.09
SS18-224ENST00000584083 PSMC1P62191 440 aaKnown RBP21.85■■□□□ 1.09
SS18-224ENST00000584083 NCOA4Q13772 614 aa21.85■■□□□ 1.09
SS18-224ENST00000584083 NFIL3Q16649 462 aa21.85■■□□□ 1.09
SS18-224ENST00000584083 CCDC142Q17RM4 750 aa21.85■■□□□ 1.09
SS18-224ENST00000584083 ARHGAP15Q53QZ3 475 aa21.85■■□□□ 1.09
SS18-224ENST00000584083 PRSS33Q8NF86 280 aa21.85■■□□□ 1.09
SS18-224ENST00000584083 OR6B3Q8NGW1 331 aa21.85■■□□□ 1.09
SS18-224ENST00000584083 TIGD1Q96MW7 591 aa21.85■■□□□ 1.09
SS18-224ENST00000584083 XYLT2Q9H1B5 865 aa21.85■■□□□ 1.09
SS18-224ENST00000584083 TBC1D17Q9HA65 648 aa21.85■■□□□ 1.09
SS18-224ENST00000584083 PI15O43692 258 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 AOC1P19801 751 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 CDC25CP30307 473 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 VIPR2P41587 438 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 VAMP7P51809 220 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 GRM2Q14416 872 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 MAPRE1Q15691 268 aaKnown RBP21.84■■□□□ 1.09
SS18-224ENST00000584083 DDR2Q16832 855 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 ZNF699Q32M78 642 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 STXBP5Q5T5C0 1151 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 GPR158Q5T848 1215 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 SDHAF4Q5VUM1 108 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 FAM171BQ6P995 826 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 C4orf50Q6ZRC1 276 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 SCN4BQ8IWT1 228 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 SMARCE1Q969G3 411 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 SHDQ96IW2 340 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 GSDMAQ96QA5 445 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 TRMT61BQ9BVS5 477 aaKnown RBP21.84■■□□□ 1.09
SS18-224ENST00000584083 MAGEC2Q9UBF1 373 aaPredicted RBP21.84■■□□□ 1.09
SS18-224ENST00000584083 MAGED2Q9UNF1 606 aaPredicted RBP21.84■■□□□ 1.09
SS18-224ENST00000584083 ZNF638Q14966 1978 aaKnown RBP21.84■■□□□ 1.09
SS18-224ENST00000584083 DENND4CQ5VZ89 1909 aa21.84■■□□□ 1.09
SS18-224ENST00000584083 MAPK13O15264 365 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 TACC1O75410 805 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 FAM163BP0C2L3 166 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 CSH1P0DML2 217 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 CSH2P0DML3 217 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 KRT13P13646 458 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 PTPN5P54829 565 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 CYP27A1Q02318 531 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 ADAM9Q13443 819 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 CFAP221Q4G0U5 840 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 SLC44A4Q53GD3 710 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 ZNF667Q5HYK9 610 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 GPIHBP1Q8IV16 184 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 FAM186BQ8IYM0 893 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 STKLD1Q8NE28 680 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 ERCC4Q92889 916 aaPredicted RBP21.83■■□□□ 1.09
SS18-224ENST00000584083 FUBP3Q96I24 572 aaKnown RBP eCLIP21.83■■□□□ 1.09
SS18-224ENST00000584083 BRD9Q9H8M2 597 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 TRPV4Q9HBA0 871 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 IL21Q9HBE4 155 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 CRTAC1Q9NQ79 661 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 PCDHA5Q9Y5H7 936 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 WDFY4Q6ZS81 3184 aa21.83■■□□□ 1.09
SS18-224ENST00000584083 NUP210Q8TEM1 1887 aaPredicted RBP21.82■■□□□ 1.08
SS18-224ENST00000584083 IKBKBO14920 756 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 KINO60870 393 aaKnown RBP21.82■■□□□ 1.08
SS18-224ENST00000584083 AKAP3O75969 853 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 VNN1O95497 513 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 PSMC3P17980 439 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 PSMC2P35998 433 aaKnown RBP21.82■■□□□ 1.08
SS18-224ENST00000584083 PRCPP42785 496 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 NUBP1P53384 320 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 CYP4F8P98187 520 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 MLF2Q15773 248 aaPredicted RBP21.82■■□□□ 1.08
SS18-224ENST00000584083 SGSM1Q2NKQ1 1148 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 ZACNQ401N2 412 aa21.82■■□□□ 1.08
SS18-224ENST00000584083 ZNF658Q5TYW1 1059 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms