RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	KIR2DL1	P43626	348 aa	Predicted RBP	5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	CSNK1E	P49674	416 aa	Known RBP	5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	STAT5B	P51692	787 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	CYP4F2	P78329	520 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	ROR1	Q01973	937 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	RUNX1T1	Q06455	604 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	C3orf38	Q5JPI3	329 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	FAM171A1	Q5VUB5	890 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	NOSTRIN	Q8IVI9	506 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	NUDT8	Q8WV74	236 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	GPRASP2	Q96D09	838 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	ERLEC1	Q96DZ1	483 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	PCED1A	Q9H1Q7	454 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	ZMYM5	Q9UJ78	669 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	CYP8B1	Q9UNU6	501 aa		5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	PIN4	Q9Y237	131 aa	Known RBP	5.57	□□□□□ -1.52
MSI2-216	ENST00000582772	WNK1	Q9H4A3	2382 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772		A0A0A0MRY4	1105 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	ANTXRL	A6NF34	631 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	RNF212B	A8MTL3	300 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	METTL12	A8MUP2	240 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	TCP11X1	B4DZS4	312 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	IPO5	O00410	1097 aa	Known RBP	5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	ANP32C	O43423	234 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	TADA2A	O75478	443 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	GABBR2	O75899	941 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	FGF19	O95750	216 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	NCAM1	P13591	858 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	FGFR4	P22455	802 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	CD6	P30203	668 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	SEC13	P55735	322 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	GRIK3	Q13003	919 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	USP4	Q13107	963 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	MRPL49	Q13405	166 aa	Known RBP	5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	TEAD4	Q15561	434 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	ISX	Q2M1V0	245 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	GPATCH4	Q5T3I0	446 aa	Known RBP	5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	PCNX4	Q63HM2	1172 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	TPGS2	Q68CL5	300 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	C14orf80	Q86SX3	495 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	METTL3	Q86U44	580 aa	Known RBP	5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	TP53INP2	Q8IXH6	220 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	ZNF295-AS1	Q8N0V1	137 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	CNNM3	Q8NE01	707 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	KCNV2	Q8TDN2	545 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	ABHD17A	Q96GS6	310 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	CATSPER2	Q96P56	530 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	MAP7D2	Q96T17	732 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	OXCT2	Q9BYC2	517 aa	Predicted RBP	5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	KIF9	Q9HAQ2	790 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	ZGRF1	Q86YA3	2104 aa		5.56	□□□□□ -1.52
MSI2-216	ENST00000582772	GSG1L2	A8MUP6	293 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	PRSS44	E7EML9	344 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	MAGEB2	O15479	319 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	DHX15	O43143	795 aa	Known RBP	5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	MSI1	O43347	362 aa	Known RBP	5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	PRPF3	O43395	683 aa	Known RBP	5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	OPA1	O60313	960 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	ATG7	O95352	703 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	SEC24A	O95486	1093 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	GP1BA	P07359	652 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	ELF1	P32519	619 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	OPRD1	P41143	372 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	KRTAP10-9	P60411	292 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	PPP2R2A	P63151	447 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	IL9R	Q01113	521 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	SHB	Q15464	509 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	TGIF1	Q15583	401 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	ZRSR2	Q15696	482 aa	Known RBP	5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	C14orf28	Q4W4Y0	310 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	CCDC184	Q52MB2	194 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	PDLIM3	Q53GG5	364 aa	Predicted RBP	5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	ZRANB3	Q5FWF4	1079 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	MANEA	Q5SRI9	462 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	DCAF12L1	Q5VU92	463 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	TMEM198	Q66K66	360 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	GAREM2	Q75VX8	874 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	GATAD2A	Q86YP4	633 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	EID2	Q8N6I1	236 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	TEX19	Q8NA77	164 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	GSTCD	Q8NEC7	633 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	NINJ1	Q92982	152 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	ATP2A3	Q93084	1043 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	ELF4	Q99607	663 aa	Predicted RBP	5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	MIR1-1HG	Q9H1L0	117 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	JPH1	Q9HDC5	661 aa	Predicted RBP	5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	AGPAT5	Q9NUQ2	364 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	TLR7	Q9NYK1	1049 aa	Known RBP	5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	WSB2	Q9NYS7	404 aa	Predicted RBP	5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	ADAM21	Q9UKJ8	722 aa		5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	KLF2	Q9Y5W3	355 aa	Predicted RBP	5.55	□□□□□ -1.52
MSI2-216	ENST00000582772	PLXNA2	O75051	1894 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772		A0A1W2PQF6	199 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	MINDY4B	A8MYZ0	360 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772		M0R2C6	588 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	KIF4A	O95239	1232 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	ITGAV	P06756	1048 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	HEXA	P06865	529 aa		5.54	□□□□□ -1.52
MSI2-216	ENST00000582772	THEGL	P0DJG4	465 aa		5.54	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms