RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 LRRTM3Q86VH5 581 aa10.73□□□□□ -0.69
RFFL-208ENST00000581039 MON1AQ86VX9 555 aa10.73□□□□□ -0.69
RFFL-208ENST00000581039 CPA6Q8N4T0 437 aa10.73□□□□□ -0.69
RFFL-208ENST00000581039 CCDC26Q8TAB7 109 aa10.73□□□□□ -0.69
RFFL-208ENST00000581039 ACDQ96AP0 544 aa10.73□□□□□ -0.69
RFFL-208ENST00000581039 CHFRQ96EP1 664 aa10.73□□□□□ -0.69
RFFL-208ENST00000581039 CDK5RAP3Q96JB5 506 aa10.73□□□□□ -0.69
RFFL-208ENST00000581039 PYM1Q9BRP8 204 aaKnown RBP10.73□□□□□ -0.69
RFFL-208ENST00000581039 ABI2Q9NYB9 513 aaPredicted RBP10.73□□□□□ -0.69
RFFL-208ENST00000581039 TBX20Q9UMR3 447 aa10.73□□□□□ -0.69
RFFL-208ENST00000581039 MAGED2Q9UNF1 606 aaPredicted RBP10.73□□□□□ -0.69
RFFL-208ENST00000581039 DERAQ9Y315 318 aa10.73□□□□□ -0.69
RFFL-208ENST00000581039 PCDHB5Q9Y5E4 795 aa10.73□□□□□ -0.69
RFFL-208ENST00000581039 A0A0B4J269 797 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 LNP1A1A4G5 178 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 ANO9A1A5B4 782 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 FAM189A1O60320 539 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 PRPF40AO75400 957 aaKnown RBP10.72□□□□□ -0.69
RFFL-208ENST00000581039 NFICP08651 508 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 CSH1P0DML2 217 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 CSH2P0DML3 217 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 CEACAM1P13688 526 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 HMGA1P17096 107 aaKnown RBP10.72□□□□□ -0.69
RFFL-208ENST00000581039 TAF6P49848 677 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 SLC12A3P55017 1021 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 NR1H3Q13133 447 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 ZNF268Q14587 947 aaPredicted RBP10.72□□□□□ -0.69
RFFL-208ENST00000581039 HYIQ5T013 277 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 WSCD1Q658N2 575 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 MYCT1Q8N699 235 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 TTC16Q8NEE8 873 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 TSTD1Q8NFU3 115 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 CD101Q93033 1021 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 PNMA5Q96PV4 448 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 ASB7Q9H672 318 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 ECT2Q9H8V3 914 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 TMEM9BQ9NQ34 198 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 DUS2Q9NX74 493 aaKnown RBP10.72□□□□□ -0.69
RFFL-208ENST00000581039 DPP3Q9NY33 737 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 CPSF3Q9UKF6 684 aaKnown RBP10.72□□□□□ -0.69
RFFL-208ENST00000581039 INVSQ9Y283 1065 aa10.72□□□□□ -0.69
RFFL-208ENST00000581039 BAHCC1Q9P281 2608 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 TMEM8BA6NDV4 472 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 K7ENM7 598 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 PIGRP01833 764 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 SPINK2P20155 84 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 CSRP1P21291 193 aaKnown RBP10.71□□□□□ -0.69
RFFL-208ENST00000581039 IFNAR2P48551 515 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 TSPY1Q01534 308 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 FAM160A1Q05DH4 1040 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 MTF1Q14872 753 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 NFE2Q16621 373 aaPredicted RBP10.71□□□□□ -0.69
RFFL-208ENST00000581039 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 NAIF1Q69YI7 327 aaPredicted RBP10.71□□□□□ -0.69
RFFL-208ENST00000581039 NUP210Q8TEM1 1887 aaPredicted RBP10.71□□□□□ -0.69
RFFL-208ENST00000581039 OSCP1Q8WVF1 389 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 KCNN1Q92952 543 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 ATP2A3Q93084 1043 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 PI4K2AQ9BTU6 479 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 ADAM33Q9BZ11 813 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.71□□□□□ -0.69
RFFL-208ENST00000581039 UXTQ9UBK9 157 aaPredicted RBP10.71□□□□□ -0.69
RFFL-208ENST00000581039 ODF2LQ9ULJ1 636 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 C2CD2Q9Y426 696 aa10.71□□□□□ -0.69
RFFL-208ENST00000581039 ATG2BQ96BY7 2078 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 FRYQ5TBA9 3013 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 TRAV19A0A0A6YYK7 116 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 KPNA7A9QM74 516 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 TULP1O00294 542 aaPredicted RBP10.7□□□□□ -0.7
RFFL-208ENST00000581039 TRAK2O60296 914 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 EIF5BO60841 1220 aaKnown RBP10.7□□□□□ -0.7
RFFL-208ENST00000581039 FAM13AO94988 1023 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 USP17L7P0C7H9 530 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 ABCD1P33897 745 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 DHPSP49366 369 aaPredicted RBP10.7□□□□□ -0.7
RFFL-208ENST00000581039 GPR15P49685 360 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 ACOT2P49753 483 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 RPL10AP62906 217 aaKnown RBP10.7□□□□□ -0.7
RFFL-208ENST00000581039 DHX8Q14562 1220 aaKnown RBP10.7□□□□□ -0.7
RFFL-208ENST00000581039 UAP1L1Q3KQV9 507 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 SDHAF4Q5VUM1 108 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 PMS2CLQ68D20 193 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 ADALQ6DHV7 355 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 SLFN12LQ6IEE8 588 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 CYP2U1Q7Z449 544 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 EZH1Q92800 747 aaPredicted RBP10.7□□□□□ -0.7
RFFL-208ENST00000581039 ZSCAN31Q96LW9 406 aaPredicted RBP10.7□□□□□ -0.7
RFFL-208ENST00000581039 CYP2S1Q96SQ9 504 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 SCNM1Q9BWG6 230 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 CCSER1Q9C0I3 900 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 ZHX3Q9H4I2 956 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 PARVGQ9HBI0 331 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 TRPC7Q9HCX4 862 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 WASF3Q9UPY6 502 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 WNT6Q9Y6F9 365 aa10.7□□□□□ -0.7
RFFL-208ENST00000581039 VWA3AA6NCI4 1184 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 PATE3B3GLJ2 98 aa10.69□□□□□ -0.7
RFFL-208ENST00000581039 CDX4O14627 284 aaPredicted RBP10.69□□□□□ -0.7
RFFL-208ENST00000581039 TOP3BO95985 862 aaKnown RBP10.69□□□□□ -0.7
RFFL-208ENST00000581039 KRT18P05783 430 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms