RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 SPATA18Q8TC71 538 aa16.63■□□□□ 0.25
PMP22-208ENST00000580584 CCDC47Q96A33 483 aaKnown RBP16.63■□□□□ 0.25
PMP22-208ENST00000580584 RSPRY1Q96DX4 576 aa16.63■□□□□ 0.25
PMP22-208ENST00000580584 MKNK1Q9BUB5 465 aa16.63■□□□□ 0.25
PMP22-208ENST00000580584 IL21Q9HBE4 155 aa16.63■□□□□ 0.25
PMP22-208ENST00000580584 PDXKO00764 312 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 LRRN2O75325 713 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 CD72P21854 359 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 HOXD11P31277 338 aaPredicted RBP16.62■□□□□ 0.25
PMP22-208ENST00000580584 NUBP1P53384 320 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 MYL6P60660 151 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 DLG4P78352 724 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 BIRC3Q13489 604 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 TRPC3Q13507 836 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 TAF12Q16514 161 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 DDR2Q16832 855 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 GPR158Q5T848 1215 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 TDRD10Q5VZ19 366 aaKnown RBP16.62■□□□□ 0.25
PMP22-208ENST00000580584 CEP135Q66GS9 1140 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 DPH6Q7L8W6 267 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 ALYREFQ86V81 257 aaKnown RBP16.62■□□□□ 0.25
PMP22-208ENST00000580584 SLC9A9Q8IVB4 645 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 CCDC105Q8IYK2 499 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 FMR1NBQ8N0W7 255 aaPredicted RBP16.62■□□□□ 0.25
PMP22-208ENST00000580584 DTWD2Q8NBA8 298 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 PJA1Q8NG27 643 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 PARD3BQ8TEW8 1205 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 ELMO3Q96BJ8 720 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 SYT15Q9BQS2 421 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 MRPL45Q9BRJ2 306 aaKnown RBP16.62■□□□□ 0.25
PMP22-208ENST00000580584 TRPV4Q9HBA0 871 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 HEBP1Q9NRV9 189 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 NME7Q9Y5B8 376 aa16.62■□□□□ 0.25
PMP22-208ENST00000580584 TCHHQ07283 1943 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 HEPACAM2A8MVW5 462 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 PHACTR2O75167 634 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 CLSTN1O94985 981 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 FGF19O95750 216 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 PDGFRBP09619 1106 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 WARSP23381 471 aaKnown RBP16.61■□□□□ 0.25
PMP22-208ENST00000580584 GDI1P31150 447 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 STARD6P59095 220 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 TNNC1P63316 161 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 PNOCQ13519 176 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 WDR72Q3MJ13 1102 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 TPRG1Q6ZUI0 275 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 SPATA2LQ8IUW3 424 aaPredicted RBP16.61■□□□□ 0.25
PMP22-208ENST00000580584 ARID3BQ8IVW6 561 aaPredicted RBP16.61■□□□□ 0.25
PMP22-208ENST00000580584 SMYD4Q8IYR2 804 aaPredicted RBP16.61■□□□□ 0.25
PMP22-208ENST00000580584 ATOH1Q92858 354 aaPredicted RBP16.61■□□□□ 0.25
PMP22-208ENST00000580584 MYLPFQ96A32 169 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 SHDQ96IW2 340 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 GCNAQ96QF7 691 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 TRMT61BQ9BVS5 477 aaKnown RBP16.61■□□□□ 0.25
PMP22-208ENST00000580584 GPR88Q9GZN0 384 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 XYLT2Q9H1B5 865 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 BRD9Q9H8M2 597 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 ABCB6Q9NP58 842 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 CRTAC1Q9NQ79 661 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 NXF1Q9UBU9 619 aaKnown RBP16.61■□□□□ 0.25
PMP22-208ENST00000580584 MAGED2Q9UNF1 606 aaPredicted RBP16.61■□□□□ 0.25
PMP22-208ENST00000580584 SIT1Q9Y3P8 196 aa16.61■□□□□ 0.25
PMP22-208ENST00000580584 MTF2Q9Y483 593 aaPredicted RBP16.61■□□□□ 0.25
PMP22-208ENST00000580584 GOLGA6L4A6NEF3 574 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 CALUO43852 315 aaPredicted RBP16.6■□□□□ 0.25
PMP22-208ENST00000580584 PRAMEF12O95522 483 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 HMGA1P17096 107 aaKnown RBP16.6■□□□□ 0.25
PMP22-208ENST00000580584 PSMC3P17980 439 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 CDC25CP30307 473 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 CLDN10P78369 228 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 PRKCQQ04759 706 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 KCNB1Q14721 858 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 UBXN2BQ14CS0 331 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 CFAP221Q4G0U5 840 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 ARHGAP15Q53QZ3 475 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 FAM171BQ6P995 826 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 TMEM150AQ86TG1 271 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 TMEM174Q8WUU8 243 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 DDX23Q9BUQ8 820 aaKnown RBP16.6■□□□□ 0.25
PMP22-208ENST00000580584 SMG9Q9H0W8 520 aaKnown RBP16.6■□□□□ 0.25
PMP22-208ENST00000580584 SNX25Q9H3E2 840 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 SMYD3Q9H7B4 428 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 CDH9Q9ULB4 789 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 TRAF3IP3Q9Y228 551 aa16.6■□□□□ 0.25
PMP22-208ENST00000580584 KANSL1LA0AUZ9 987 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 KIF20AO95235 890 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 VNN1O95497 513 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 GLULP15104 373 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 NR2F2P24468 414 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 RAP1GAPP47736 663 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 MRE11P49959 708 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 NLRP12P59046 1061 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 RPL10AP62906 217 aaKnown RBP16.59■□□□□ 0.25
PMP22-208ENST00000580584 CYP27A1Q02318 531 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 NCOA4Q13772 614 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 ZNF699Q32M78 642 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 MDH1BQ5I0G3 518 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 SCN4BQ8IWT1 228 aa16.59■□□□□ 0.25
PMP22-208ENST00000580584 GUF1Q8N442 669 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms