RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 MAB21L3Q8N8X9 362 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 POMGNT1Q8WZA1 660 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 DDX1Q92499 740 aaKnown RBP20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 SMC3Q9UQE7 1217 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 ZFHX4Q86UP3 3567 aa20.69■□□□□ 0.9
CDKN2A-213ENST00000579122 RPP40O75818 363 aaKnown RBP20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 CSH1P0DML2 217 aa20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 CSH2P0DML3 217 aa20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 ADSSP30520 456 aa20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 LIMK1P53667 647 aa20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 ZNF268Q14587 947 aaPredicted RBP20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 LARP1BQ659C4 914 aaKnown RBP20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 MON1AQ86VX9 555 aa20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 LEO1Q8WVC0 666 aaPredicted RBP20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 MRPS31Q92665 395 aaKnown RBP20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 CHFRQ96EP1 664 aa20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 EBF3Q9H4W6 596 aa20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 TMLHEQ9NVH6 421 aa20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 SLC8A2Q9UPR5 921 aa20.68■□□□□ 0.9
CDKN2A-213ENST00000579122 OTOL1A6NHN0 477 aaPredicted RBP20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 AXIN1O15169 862 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 PRPF40AO75400 957 aaKnown RBP20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 PPP1R37O75864 691 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 AKAP3O75969 853 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 KRT37O76014 449 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 EPN2O95208 641 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 RAP1GAPP47736 663 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 SF3A1Q15459 793 aaKnown RBP20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 TXNDC8Q6A555 127 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 TRIM68Q6AZZ1 485 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 CC2D1AQ6P1N0 951 aaPredicted RBP20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 SFR1Q86XK3 245 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 ACBD6Q9BR61 282 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 PI4K2AQ9BTU6 479 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 STRA6Q9BX79 667 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 ARRDC1-AS1Q9H2J1 176 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 IKZF4Q9H2S9 585 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 SEL1LQ9UBV2 794 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 CHD8Q9HCK8 2581 aa20.67■□□□□ 0.9
CDKN2A-213ENST00000579122 TCHHQ07283 1943 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 CD2BP2O95400 341 aaKnown RBP20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 ZNF806P0C7X5 589 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 DRD1P21728 446 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 PXNP49023 591 aaPredicted RBP20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 GPR15P49685 360 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 PDGFRLQ15198 375 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 AASDHQ4L235 1098 aaPredicted RBP20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 IL31Q6EBC2 164 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 DYMQ7RTS9 669 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 PDCL2Q8N4E4 241 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 CAMKK1Q8N5S9 505 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 EXOC4Q96A65 974 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 ABCB6Q9NP58 842 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 UXTQ9UBK9 157 aaPredicted RBP20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 MAGED2Q9UNF1 606 aaPredicted RBP20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 EXOC7Q9UPT5 735 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 RALGAPA1Q6GYQ0 2036 aa20.66■□□□□ 0.9
CDKN2A-213ENST00000579122 DENND4CQ5VZ89 1909 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 RNF40O75150 1001 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 NOL4O94818 638 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 EGFP01133 1207 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 CCDC192P0DO97 292 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 ARSAP15289 507 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 POLR2BP30876 1174 aaKnown RBP20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 RPL10AP62906 217 aaKnown RBP20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 KBTBD6Q86V97 674 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 BRSK2Q8IWQ3 736 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 TMEM86AQ8N2M4 240 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 C12orf50Q8NA57 414 aaPredicted RBP20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 RIN3Q8TB24 985 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 TRMT2BQ96GJ1 504 aaKnown RBP20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 EPSTI1Q96J88 318 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 FAM213AQ9BRX8 229 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 MRPL44Q9H9J2 332 aaKnown RBP20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 DDX43Q9NXZ2 648 aaKnown RBP20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 STK17AQ9UEE5 414 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 L1RE1Q9UN81 338 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 AGAP1Q9UPQ3 857 aa20.65■□□□□ 0.9
CDKN2A-213ENST00000579122 HUS1O60921 280 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 LDHAP00338 332 aaKnown RBP20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 ITGB3P05106 788 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 GAP43P17677 238 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 GALK1P51570 392 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 TFAMQ00059 246 aaKnown RBP20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 MYL7Q01449 175 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 SF3A2Q15428 464 aaKnown RBP20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 DDR2Q16832 855 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 FBXO43Q4G163 708 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 INTS6LQ5JSJ4 861 aaKnown RBP20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 L1TD1Q5T7N2 865 aaKnown RBP20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 CPA6Q8N4T0 437 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 LRRC52Q8N7C0 313 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 C1orf127Q8N9H9 656 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 STKLD1Q8NE28 680 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 SPATA18Q8TC71 538 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 CACTINQ8WUQ7 758 aaKnown RBP20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 ZC3H10Q96K80 434 aaKnown RBP20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 MYRFLQ96LU7 910 aa20.64■□□□□ 0.89
CDKN2A-213ENST00000579122 ACCSQ96QU6 501 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms