RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 SOWAHAQ2M3V2 549 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 ZNF528Q3MIS6 628 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 INTS6LQ5JSJ4 861 aaKnown RBP17.05■□□□□ 0.32
CRLF3-203ENST00000578692 OSTM1Q86WC4 334 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 NELFCDQ8IXH7 590 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 ADSSL1Q8N142 457 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 LEO1Q8WVC0 666 aaPredicted RBP17.05■□□□□ 0.32
CRLF3-203ENST00000578692 SCFD1Q8WVM8 642 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 HPDLQ96IR7 371 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 SLC39A2Q9NP94 309 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 AGPAT3Q9NRZ7 376 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 OBP2AQ9NY56 170 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 PIAS3Q9Y6X2 628 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 PTPRJQ12913 1337 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 TICRRQ7Z2Z1 1910 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 CACNA1IQ9P0X4 2223 aa17.05■□□□□ 0.32
CRLF3-203ENST00000578692 ARNTLO00327 626 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 F11P03951 625 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 HMGA1P17096 107 aaKnown RBP17.04■□□□□ 0.32
CRLF3-203ENST00000578692 CSTF1Q05048 431 aaKnown RBP17.04■□□□□ 0.32
CRLF3-203ENST00000578692 CUL4BQ13620 913 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 SNRNP35Q16560 246 aaKnown RBP17.04■□□□□ 0.32
CRLF3-203ENST00000578692 ARHGAP29Q52LW3 1261 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 WDR49Q8IV35 697 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 CEP57L1Q8IYX8 460 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 ADGRF2Q8IZF7 708 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 ZNF687Q8N1G0 1237 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 LRRC3BQ96PB8 259 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 FNBP1Q96RU3 617 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 SLC46A2Q9BY10 475 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 SERTAD1Q9UHV2 236 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 UBE4BO95155 1302 aa17.04■□□□□ 0.32
CRLF3-203ENST00000578692 CSH1P0DML2 217 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 CSH2P0DML3 217 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 TNNI1P19237 187 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 CCNE1P24864 410 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 CYP2F1P24903 491 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 PCSK1P29120 753 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 GPR15P49685 360 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 CYP2J2P51589 502 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 RPL10AP62906 217 aaKnown RBP17.03■□□□□ 0.32
CRLF3-203ENST00000578692 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
CRLF3-203ENST00000578692 DDR2Q16832 855 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 HS2ST1Q7LGA3 356 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 TRAPPC11Q7Z392 1133 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 XXYLT1Q8NBI6 393 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 BPIFB1Q8TDL5 484 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 PKMYT1Q99640 499 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 LMAN1LQ9HAT1 526 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 ABCB6Q9NP58 842 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 ZMYM5Q9UJ78 669 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 MAGED2Q9UNF1 606 aaPredicted RBP17.03■□□□□ 0.32
CRLF3-203ENST00000578692 ZFHX2Q9C0A1 2572 aaPredicted RBP17.03■□□□□ 0.32
CRLF3-203ENST00000578692 COL4A2P08572 1712 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 PATJQ8NI35 1801 aa17.03■□□□□ 0.32
CRLF3-203ENST00000578692 MYBPHLA2RUH7 354 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 HCRTO43612 131 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 CST3P01034 146 aaPredicted RBP17.02■□□□□ 0.32
CRLF3-203ENST00000578692 SLFN14P0C7P3 912 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 DLATP10515 647 aaKnown RBP17.02■□□□□ 0.32
CRLF3-203ENST00000578692 DMDP11532 3685 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 KPNA1P52294 538 aaPredicted RBP17.02■□□□□ 0.32
CRLF3-203ENST00000578692 NLRP12P59046 1061 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 PSMD6Q15008 389 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 SDHAF4Q5VUM1 108 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 FAM171BQ6P995 826 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 LIMS2Q7Z4I7 341 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 TMEM150AQ86TG1 271 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 SPATA2LQ8IUW3 424 aaPredicted RBP17.02■□□□□ 0.32
CRLF3-203ENST00000578692 GRAMD1CQ8IYS0 662 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 CMTM8Q8IZV2 173 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 CELF5Q8N6W0 485 aaKnown RBP17.02■□□□□ 0.32
CRLF3-203ENST00000578692 MAB21L3Q8N8X9 362 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 NUP210Q8TEM1 1887 aaPredicted RBP17.02■□□□□ 0.32
CRLF3-203ENST00000578692 MSANTD3Q96H12 275 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 ZFYVE19Q96K21 471 aa17.02■□□□□ 0.32
CRLF3-203ENST00000578692 C8orf33Q9H7E9 229 aaPredicted RBP17.02■□□□□ 0.32
CRLF3-203ENST00000578692 CGNQ9P2M7 1197 aaKnown RBP17.02■□□□□ 0.32
CRLF3-203ENST00000578692 PRAMEF12O95522 483 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 LMO2P25791 158 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 DDX6P26196 483 aaKnown RBP eCLIP17.02■□□□□ 0.31
CRLF3-203ENST00000578692 CYP24A1Q07973 514 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 MTAPQ13126 283 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 KNOP1Q1ED39 458 aaKnown RBP17.02■□□□□ 0.31
CRLF3-203ENST00000578692 BMT2Q1RMZ1 405 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 CFAP221Q4G0U5 840 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 C1orf228Q6PIY5 440 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 C12orf56Q8IXR9 622 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 STKLD1Q8NE28 680 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 KBTBD7Q8WVZ9 684 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 CCDC127Q96BQ5 260 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 FUBP3Q96I24 572 aaKnown RBP eCLIP17.02■□□□□ 0.31
CRLF3-203ENST00000578692 MMS19Q96T76 1030 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 CGRRF1Q99675 332 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 SMG9Q9H0W8 520 aaKnown RBP17.02■□□□□ 0.31
CRLF3-203ENST00000578692 CHRDQ9H2X0 955 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 THG1LQ9NWX6 298 aaKnown RBP17.02■□□□□ 0.31
CRLF3-203ENST00000578692 GTSE1Q9NYZ3 720 aa17.02■□□□□ 0.31
CRLF3-203ENST00000578692 UXTQ9UBK9 157 aaPredicted RBP17.02■□□□□ 0.31
CRLF3-203ENST00000578692 CDH9Q9ULB4 789 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms