RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 HIST1H2AJQ99878 128 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 H2AFJQ9BTM1 129 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 FLT1P17948 1338 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 CEMIPQ8WUJ3 1361 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 ABCA6Q8N139 1617 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 CLASP2O75122 1294 aaKnown RBP11.18□□□□□ -0.62
SEC22B-201ENST00000578049 CAND2O75155 1236 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 SERPINI2O75830 405 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 CD4P01730 458 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 MEA1Q16626 185 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 ACBD5Q5T8D3 534 aaPredicted RBP11.18□□□□□ -0.62
SEC22B-201ENST00000578049 RNF219Q5W0B1 726 aaPredicted RBP11.18□□□□□ -0.62
SEC22B-201ENST00000578049 TRAPPC9Q96Q05 1148 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 THAP2Q9H0W7 228 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 CAAP1Q9H8G2 361 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 EVPLLA8MZ36 301 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 NEMP1O14524 444 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 TTKP33981 857 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 GPSM2P81274 684 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 FAM111AQ96PZ2 611 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 CASS4Q9NQ75 786 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 HAO1Q9UJM8 370 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 LZTS1Q9Y250 596 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 ACTL7BQ9Y614 415 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 TLR2O60603 784 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 HLA-DPA1P20036 260 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 NNMTP40261 264 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 PTGER2P43116 358 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 RBBP7Q16576 425 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 ATPAF2Q8N5M1 289 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 EPS8L3Q8TE67 593 aaKnown RBP11.18□□□□□ -0.62
SEC22B-201ENST00000578049 ARHGAP20Q9P2F6 1191 aa11.18□□□□□ -0.62
SEC22B-201ENST00000578049 SERPINB8P50452 374 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 PURAQ00577 322 aaKnown RBP11.17□□□□□ -0.62
SEC22B-201ENST00000578049 SWT1Q5T5J6 900 aaKnown RBP11.17□□□□□ -0.62
SEC22B-201ENST00000578049 TTLL6Q8N841 843 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 PRMT7Q9NVM4 692 aaPredicted RBP11.17□□□□□ -0.62
SEC22B-201ENST00000578049 MAP3K20Q9NYL2 800 aaKnown RBP11.17□□□□□ -0.62
SEC22B-201ENST00000578049 FAM237AA0A1B0GTK4 181 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 USP1O94782 785 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 PROSCO94903 275 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 CD44P16070 742 aaKnown RBP11.17□□□□□ -0.62
SEC22B-201ENST00000578049 TFDP3Q5H9I0 405 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 GALNT4Q8N4A0 578 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 ASIC4Q96FT7 647 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 PCDH9Q9HC56 1237 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 GDF3Q9NR23 364 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 ECM2O94769 699 aaPredicted RBP11.17□□□□□ -0.62
SEC22B-201ENST00000578049 GARTP22102 1010 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 SNAP25P60880 206 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 AGAP9Q5VTM2 703 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 EEPD1Q7L9B9 569 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 RMDN2Q96LZ7 410 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 NDUFB10O96000 172 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 NUDT2P50583 147 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 TMC3Q7Z5M5 1100 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 RNF135Q8IUD6 432 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 FUKQ8N0W3 1084 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 RNF149Q8NC42 400 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 SHCBP1Q8NEM2 672 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 TRAPPC3O43617 180 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 GRB10Q13322 594 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 ZNF398Q8TD17 642 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 OPTNQ96CV9 577 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 VCPIP1Q96JH7 1222 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 CATSPERBQ9H7T0 1116 aa11.17□□□□□ -0.62
SEC22B-201ENST00000578049 SRP68Q9UHB9 627 aaKnown RBP11.17□□□□□ -0.62
SEC22B-201ENST00000578049 EEF2KO00418 725 aaKnown RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 RAD17O75943 681 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 ADORA2BP29275 332 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 SULT1E1P49888 294 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 CRAMP1Q96RY5 1269 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 MXRA8Q9BRK3 442 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 TEX13BQ9BXU2 312 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 IL25Q9H293 177 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 LOC100653049A0A140TA62 436 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 KRT34O76011 436 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 TMEM132DQ14C87 1099 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 PCNX4Q63HM2 1172 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 SEPT1Q8WYJ6 367 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 AGAP1Q9UPQ3 857 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 SNAP23O00161 211 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 NDUFS3O75489 264 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 SOAT2O75908 522 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 GLI1P08151 1106 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 NME3Q13232 169 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 RASA2Q15283 850 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 RNF217Q8TC41 542 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 AGR3Q8TD06 166 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 STK32AQ8WU08 396 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 ZNF669Q96BR6 464 aaPredicted RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 SH3GL1Q99961 368 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 TDRD3Q9H7E2 651 aaKnown RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 DAGLAQ9Y4D2 1042 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 NPHP3-ACAD11A0A0J9YXS1 232 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 MAPTP10636 758 aaKnown RBP11.16□□□□□ -0.62
SEC22B-201ENST00000578049 KLK7P49862 253 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 CACNA2D1P54289 1103 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 RAD23AP54725 363 aa11.16□□□□□ -0.62
SEC22B-201ENST00000578049 IER5Q5VY09 327 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms