RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 SRGAP2CP0DJJ0 459 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 RDXP35241 583 aaKnown RBP9.42□□□□□ -0.9
NCBP3-204ENST00000574911 ADCY1Q08828 1119 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 MGAT5Q09328 741 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 MXD4Q14582 209 aaPredicted RBP9.42□□□□□ -0.9
NCBP3-204ENST00000574911 ZKSCAN8Q15776 578 aaPredicted RBP9.42□□□□□ -0.9
NCBP3-204ENST00000574911 ZNF699Q32M78 642 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 PTPN20Q4JDL3 420 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 TSHZ1Q6ZSZ6 1077 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 CENPUQ71F23 418 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 TBC1D1Q86TI0 1168 aaPredicted RBP9.42□□□□□ -0.9
NCBP3-204ENST00000574911 FITM2Q8N6M3 262 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.42□□□□□ -0.9
NCBP3-204ENST00000574911 TMEM121Q9BTD3 319 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 C2orf40Q9H1Z8 148 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 PPCSQ9HAB8 311 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 NOD2Q9HC29 1040 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 SLC24A2Q9UI40 661 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 CYTH4Q9UIA0 394 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 CEP83Q9Y592 693 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 PPP2R3BQ9Y5P8 575 aa9.42□□□□□ -0.9
NCBP3-204ENST00000574911 POC1B-GALNT4F8VUJ3 575 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 B4GALT4O60513 344 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 SPAG7O75391 227 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 LGR5O75473 907 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 ITGBL1O95965 494 aaPredicted RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 PSMA2P25787 234 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 RFC1P35251 1148 aaPredicted RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 YWHAEP62258 255 aaKnown RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 TFAMQ00059 246 aaKnown RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 CCDC15Q0P6D6 951 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 ZNF268Q14587 947 aaPredicted RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 PKN2Q16513 984 aaKnown RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 MAPK6Q16659 721 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 LY6KQ17RY6 165 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 MPZL3Q6UWV2 235 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 SCARA5Q6ZMJ2 495 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 RGS9BPQ6ZS82 235 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 PCGF5Q86SE9 256 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 JOSD2Q8TAC2 188 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 RMDN2Q96LZ7 410 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 PHACTR1Q9C0D0 580 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 TRABDQ9H4I3 376 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 SENP1Q9P0U3 644 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 POLIQ9UNA4 740 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 SMG5Q9UPR3 1016 aaKnown RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 LRRC37A2A6NM11 1700 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 SGK1O00141 431 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 LRCH4O75427 683 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 USP2O75604 605 aaPredicted RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 TNNC2P02585 160 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 KRT3P12035 628 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 IL1R2P27930 398 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 POLR2BP30876 1174 aaKnown RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 SLC8A1P32418 973 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 GPX6P59796 221 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 KCNJ2P63252 427 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 PDIA2Q13087 525 aaKnown RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 EFHC2Q5JST6 749 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 HP1BP3Q5SSJ5 553 aaPredicted RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 ECHDC2Q86YB7 292 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 ZBED8Q8IZ13 594 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 KIAA0319LQ8IZA0 1049 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 ANKLE1Q8NAG6 615 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 RNF149Q8NC42 400 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 FNIP1Q8TF40 1166 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 ANKRD36BP1Q96IX9 119 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 GPR20Q99678 358 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 PITPNM3Q9BZ71 974 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 FZD8Q9H461 694 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 VPS37BQ9H9H4 285 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 TJP2Q9UDY2 1190 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 ZMYND8Q9ULU4 1186 aaPredicted RBP9.41□□□□□ -0.9
NCBP3-204ENST00000574911 STARD13Q9Y3M8 1113 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 SNCAIPQ9Y6H5 919 aa9.41□□□□□ -0.9
NCBP3-204ENST00000574911 GOLGA8SH3BPF8 625 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 ACKR2O00590 384 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 MED7O43513 233 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 KRT7P08729 469 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 ALADP13716 330 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 KDELR1P24390 212 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 OTUD4Q01804 1114 aaKnown RBP9.4□□□□□ -0.9
NCBP3-204ENST00000574911 SPARCL1Q14515 664 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 BBS12Q6ZW61 710 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 ASRGL1Q7L266 308 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 DEFB132Q7Z7B7 95 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 EXOC8Q8IYI6 725 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 THNSL1Q8IYQ7 743 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 LRRC71Q8N4P6 559 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 NAT8LQ8N9F0 302 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 TTC13Q8NBP0 860 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 ACTL9Q8TC94 416 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 BCO2Q9BYV7 579 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 ZWILCHQ9H900 591 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 KIF9Q9HAQ2 790 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 ARHGEF3Q9NR81 526 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 GGA3Q9NZ52 723 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 KLHL14Q9P2G3 628 aa9.4□□□□□ -0.9
NCBP3-204ENST00000574911 FETUBQ9UGM5 382 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms