RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CPB1P15086 417 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 WARSP23381 471 aaKnown RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 TKTP29401 623 aaKnown RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 CYLC1P35663 651 aaPredicted RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 GLUD2P49448 558 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 NDST1P52848 882 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 RABGGTBP53611 331 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 CDH8P55286 799 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 JAM2P57087 298 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 SLC8A3P57103 927 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 CREMQ03060 361 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 GOLGA8FQ08AF8 430 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 GOLGA8DPQ0D2H9 430 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 INCA1Q0VD86 236 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 TBX2Q13207 712 aaPredicted RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 SOWAHAQ2M3V2 549 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 USP41Q3LFD5 358 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 CTXN3Q4LDR2 81 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 TIGD5Q53EQ6 642 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 SGO2Q562F6 1265 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 RASIP1Q5U651 963 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 FAM171A1Q5VUB5 890 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 WSCD1Q658N2 575 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 CYP26C1Q6V0L0 522 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 ANKS3Q6ZW76 656 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 UNC93AQ86WB7 457 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 SLC39A11Q8N1S5 342 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 TC2NQ8N9U0 490 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 BAP1Q92560 729 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 IGSF21Q96ID5 467 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 KREMEN1Q96MU8 473 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 PANX2Q96RD6 677 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 PPP1R9BQ96SB3 815 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 BAG1Q99933 345 aaPredicted RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 SYT15Q9BQS2 421 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 MRPL45Q9BRJ2 306 aaKnown RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 TTPALQ9BTX7 342 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 HERC2P3Q9BVR0 1158 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 CWH43Q9H720 699 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 LUC7LQ9NQ29 371 aaKnown RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 ENTPD7Q9NQZ7 604 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 MARCH5Q9NX47 278 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 HESX1Q9UBX0 185 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 AJAP1Q9UKB5 411 aaPredicted RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 MTUS1Q9ULD2 1270 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 TIMM13Q9Y5L4 95 aaPredicted RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 KIAA0100Q14667 2235 aaKnown RBP7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 SCN5AQ14524 2016 aa7.01□□□□□ -1.29
CTDNEP1-204ENST00000570484 LCHNA4D1U4 455 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 LINC01553A4QN01 128 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 OR6C75A6NL08 312 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 RNF223E7ERA6 249 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 M0QYV0 167 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 FOXN3O00409 490 aaPredicted RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 CYP26A1O43174 497 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 AKR1B10O60218 316 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 FGF18O76093 207 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 CSPG5O95196 566 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 SOD2P04179 222 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 CYP11A1P05108 521 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 FAM163BP0C2L3 166 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 ANXA13P27216 316 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 BMP8BP34820 402 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 GNL1P36915 607 aaPredicted RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 PSMC1P62191 440 aaKnown RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 ORC1Q13415 861 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 STILQ15468 1287 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 SPA17Q15506 151 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 MAPRE1Q15691 268 aaKnown RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 PSMD5Q16401 504 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 TAF3Q5VWG9 929 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 TMEM173Q86WV6 379 aaPredicted RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 ZNF677Q86XU0 584 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 FAM71AQ8IYT1 594 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 DCP1BQ8IZD4 617 aaKnown RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 TXLNBQ8N3L3 684 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 B3GALNT2Q8NCR0 500 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 MSANTD4Q8NCY6 345 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 EPS8L1Q8TE68 723 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 KBTBD7Q8WVZ9 684 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 RIN2Q8WYP3 895 aaPredicted RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 CLP1Q92989 425 aaKnown RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 TMEM176AQ96HP8 235 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 CCDC42Q96M95 316 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 HEXIM2Q96MH2 286 aaKnown RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 NOX5Q96PH1 765 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 TGS1Q96RS0 853 aaKnown RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 MED10Q9BTT4 135 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 PLVAPQ9BX97 442 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 OXCT2Q9BYC2 517 aaPredicted RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 ZMYND15Q9H091 742 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 SDCBP2Q9H190 292 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 SLC28A3Q9HAS3 691 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 MRPL17Q9NRX2 175 aaKnown RBP7□□□□□ -1.29
CTDNEP1-204ENST00000570484 FAM49BQ9NUQ9 324 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 HMGXB4Q9UGU5 601 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 CDH9Q9ULB4 789 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 SSX2IPQ9Y2D8 614 aa7□□□□□ -1.29
CTDNEP1-204ENST00000570484 STXBP5LQ9Y2K9 1186 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms