RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 MYBPHLA2RUH7 354 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 KINO60870 393 aaKnown RBP13.95□□□□□ -0.18
CNOT1-220ENST00000569916 ATP2C2O75185 946 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 ECI2O75521 394 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 SMC2O95347 1197 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 LMO2P25791 158 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 RPL13P26373 211 aaKnown RBP13.95□□□□□ -0.18
CNOT1-220ENST00000569916 ANP32AP39687 249 aaKnown RBP13.95□□□□□ -0.18
CNOT1-220ENST00000569916 PRCPP42785 496 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 GPR15P49685 360 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 VAMP7P51809 220 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 PSMC1P62191 440 aaKnown RBP13.95□□□□□ -0.18
CNOT1-220ENST00000569916 TNNC1P63316 161 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 ADAM9Q13443 819 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 NCOA4Q13772 614 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 VEPH1Q14D04 833 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 ZNF699Q32M78 642 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 ZACNQ401N2 412 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 CFAP221Q4G0U5 840 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 FAM78AQ5JUQ0 283 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 CWF19L1Q69YN2 538 aaKnown RBP13.95□□□□□ -0.18
CNOT1-220ENST00000569916 FAM171BQ6P995 826 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 INTS8Q75QN2 995 aaKnown RBP13.95□□□□□ -0.18
CNOT1-220ENST00000569916 GAREM2Q75VX8 874 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 FAM186BQ8IYM0 893 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 FAM200AQ8TCP9 573 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 GPR152Q8TDT2 470 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 GIPC2Q8TF65 315 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 ZSWIM3Q96MP5 696 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 ASB16Q96NS5 453 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 ABCB6Q9NP58 842 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 CRTAC1Q9NQ79 661 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 WNT16Q9UBV4 365 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 HOOK1Q9UJC3 728 aaKnown RBP13.95□□□□□ -0.18
CNOT1-220ENST00000569916 FBXL21Q9UKT6 434 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 CDH9Q9ULB4 789 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 ARIH1Q9Y4X5 557 aaPredicted RBP13.95□□□□□ -0.18
CNOT1-220ENST00000569916 TICRRQ7Z2Z1 1910 aa13.95□□□□□ -0.18
CNOT1-220ENST00000569916 KRBA1A5PL33 1030 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 IKBKBO14920 756 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 FAM163BP0C2L3 166 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 TRIM49P0CI25 452 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 TRIM49CP0CI26 452 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 CYP2F1P24903 491 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 GABRR2P28476 465 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 PSMC2P35998 433 aaKnown RBP13.94□□□□□ -0.18
CNOT1-220ENST00000569916 GPC5P78333 572 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 ENPEPQ07075 957 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 STXBP5Q5T5C0 1151 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 TANGO2Q6ICL3 276 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 SV2AQ7L0J3 742 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 SIX5Q8N196 739 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 STKLD1Q8NE28 680 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 MYLPFQ96A32 169 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 ELSPBP1Q96BH3 223 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 ELMO3Q96BJ8 720 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 FUBP3Q96I24 572 aaKnown RBP eCLIP13.94□□□□□ -0.18
CNOT1-220ENST00000569916 MKNK1Q9BUB5 465 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 PLA2G2FQ9BZM2 168 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 SMYD3Q9H7B4 428 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 IL21Q9HBE4 155 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 NXF1Q9UBU9 619 aaKnown RBP13.94□□□□□ -0.18
CNOT1-220ENST00000569916 ANAPC1Q9H1A4 1944 aa13.94□□□□□ -0.18
CNOT1-220ENST00000569916 NCANO14594 1321 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 ZNF638Q14966 1978 aaKnown RBP13.93□□□□□ -0.18
CNOT1-220ENST00000569916 FGF19O95750 216 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 PDGFRBP09619 1106 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 HMGA1P17096 107 aaKnown RBP13.93□□□□□ -0.18
CNOT1-220ENST00000569916 NPR3P17342 541 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 AVPR2P30518 371 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 PMS1P54277 932 aaKnown RBP13.93□□□□□ -0.18
CNOT1-220ENST00000569916 MCCD1P59942 119 aaPredicted RBP13.93□□□□□ -0.18
CNOT1-220ENST00000569916 PPP3CAQ08209 521 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 ZNF667Q5HYK9 610 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 SDHAF4Q5VUM1 108 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 SPATA2LQ8IUW3 424 aaPredicted RBP13.93□□□□□ -0.18
CNOT1-220ENST00000569916 ZC3H3Q8IXZ2 948 aaKnown RBP13.93□□□□□ -0.18
CNOT1-220ENST00000569916 ADSSL1Q8N142 457 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 ZSCAN18Q8TBC5 510 aaPredicted RBP13.93□□□□□ -0.18
CNOT1-220ENST00000569916 SMARCD2Q92925 531 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 EEF2KMTQ96G04 330 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 GTPBP4Q9BZE4 634 aaKnown RBP13.93□□□□□ -0.18
CNOT1-220ENST00000569916 GPR88Q9GZN0 384 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 SNX25Q9H3E2 840 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 ATXN3LQ9H3M9 355 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 MFSD1Q9H3U5 465 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 DPEP3Q9H4B8 488 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 TRPV4Q9HBA0 871 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 MAN1B1Q9UKM7 699 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 CA14Q9ULX7 337 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 HELZP42694 1942 aaKnown RBP13.93□□□□□ -0.18
CNOT1-220ENST00000569916 MIA3Q5JRA6 1907 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 ZDBF2Q9HCK1 2354 aa13.93□□□□□ -0.18
CNOT1-220ENST00000569916 PATJQ8NI35 1801 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 TRIM49BA6NDI0 452 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 ASS1P00966 412 aaKnown RBP13.92□□□□□ -0.18
CNOT1-220ENST00000569916 HLA-DRAP01903 254 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 KRT13P13646 458 aa13.92□□□□□ -0.18
CNOT1-220ENST00000569916 CDC25CP30307 473 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms