RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ZIK1Q3SY52 487 aaPredicted RBP4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 COBLL1Q53SF7 1204 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 C3orf38Q5JPI3 329 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 RBM20Q5T481 1227 aaKnown RBP4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 CCDC181Q5TID7 509 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 KIAA0895LQ68EN5 471 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 TMEM108Q6UXF1 575 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 ZNF280BQ86YH2 543 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 PJA1Q8NG27 643 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 COQ10AQ96MF6 247 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 OSBPL9Q96SU4 736 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 TBCCD1Q9NVR7 557 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 KCTD5Q9NXV2 234 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 TMX2Q9Y320 296 aa4.83□□□□□ -1.64
HERPUD1-212ENST00000567944 A0A0B4J269 797 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 WDR27A2RRH5 827 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 CYR61O00622 381 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 BRAFP15056 766 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 PIK3CBP42338 1070 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 GDF5P43026 501 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 LILRA4P59901 499 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 HTRA4P83105 476 aaPredicted RBP4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 PURAQ00577 322 aaKnown RBP4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 SP2Q02086 613 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 TAP1Q03518 808 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 TUBB3Q13509 450 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 FHL2Q14192 279 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 IQCB1Q15051 598 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 AMOTQ4VCS5 1084 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 DCAF12L1Q5VU92 463 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 LMBRD2Q68DH5 695 aaPredicted RBP4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 LAIR1Q6GTX8 287 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 ZDHHC24Q6UX98 284 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 GAS2L3Q86XJ1 694 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 MYCBPAPQ8TBZ2 947 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 PHKBQ93100 1093 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 SUCLG2Q96I99 432 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 MSLNLQ96KJ4 702 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 PRRX2Q99811 253 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 AIFM2Q9BRQ8 373 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 NAA15Q9BXJ9 866 aaKnown RBP4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 ZNF518BQ9C0D4 1074 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 LRRC27Q9C0I9 530 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 BTBD1Q9H0C5 482 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 KIAA1586Q9HCI6 787 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 SERHLQ9NQF3 203 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 AFF4Q9UHB7 1163 aaKnown RBP4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 FAM50BQ9Y247 325 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 SSX2IPQ9Y2D8 614 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 TBC1D30Q9Y2I9 924 aa4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.82□□□□□ -1.64
HERPUD1-212ENST00000567944 F5H697 171 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 PMM2O15305 246 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 TBC1D4O60343 1298 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 CAND2O75155 1236 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 SOAT2O75908 522 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 ESRRBO95718 433 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 MAP4K4O95819 1239 aaPredicted RBP4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 ATXN1LP0C7T5 689 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 HKR1P10072 659 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 IL1R1P14778 569 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 TYRP1P17643 537 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 ITGALP20701 1170 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 WNT3P56703 355 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 RPS16P62249 146 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 DPTQ07507 201 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 MAP9Q49MG5 647 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 PREPLQ4J6C6 727 aaPredicted RBP4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 HECTD2Q5U5R9 776 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 Q6ZNX1 250 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 LCORLQ8N3X6 602 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 SLC44A3Q8N4M1 653 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 GPR150Q8NGU9 434 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 TTPALQ9BTX7 342 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 TOR3AQ9H497 397 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 CASS4Q9NQ75 786 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 CHST12Q9NRB3 414 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 SACM1LQ9NTJ5 587 aa4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 TESQ9UGI8 421 aaKnown RBP4.81□□□□□ -1.64
HERPUD1-212ENST00000567944 ADGRA2Q96PE1 1338 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 hCG_1984214I3L0E3 225 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 PYCARD-AS1I3L0S3 204 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 YY2O15391 372 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 MGEA5O60502 916 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 PQBP1O60828 265 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 ERBB2P04626 1255 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 RHOP08100 348 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 PDHA1P08559 390 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 ELFN1P0C7U0 828 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 LOXL3P58215 753 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 BLOC1S1P78537 153 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 SAFBQ15424 915 aaKnown RBP eCLIP4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 KSR2Q6VAB6 950 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 USP51Q70EK9 711 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 SORCS2Q96PQ0 1159 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 PTDSS2Q9BVG9 487 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 MS4A7Q9GZW8 240 aaPredicted RBP4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 NUP62CLQ9H1M0 184 aa4.8□□□□□ -1.64
HERPUD1-212ENST00000567944 IKZF4Q9H2S9 585 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms