RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 FGFR1P11362 822 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 ODC1P11926 461 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 TNNT1P13805 278 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 TYMPP19971 482 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 IGFBP4P22692 258 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 PBX2P40425 430 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 LHX1P48742 406 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 GALCP54803 685 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 HADHBP55084 474 aaKnown RBP13.29□□□□□ -0.28
CFDP1-207ENST00000566901 CNGA2Q16280 664 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 SGO2Q562F6 1265 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 TMEM240Q5SV17 173 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 ARHGAP17Q68EM7 881 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 ACAD10Q6JQN1 1059 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 DEFB128Q7Z7B8 93 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 PHF13Q86YI8 300 aaPredicted RBP13.29□□□□□ -0.28
CFDP1-207ENST00000566901 LRRC43Q8N309 656 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 PDCL2Q8N4E4 241 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 C3orf58Q8NDZ4 430 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 UBE2Q2Q8WVN8 375 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 RFFLQ8WZ73 363 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 SECISBP2LQ93073 1101 aaKnown RBP13.29□□□□□ -0.28
CFDP1-207ENST00000566901 TNIP3Q96KP6 325 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 SUSD3Q96L08 255 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 TWNKQ96RR1 684 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 PBX4Q9BYU1 374 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 SNX25Q9H3E2 840 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 IL23AQ9NPF7 189 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 AVENQ9NQS1 362 aaPredicted RBP13.29□□□□□ -0.28
CFDP1-207ENST00000566901 PRDM6Q9NQX0 595 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 HMGXB4Q9UGU5 601 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 GTF3C4Q9UKN8 822 aa13.29□□□□□ -0.28
CFDP1-207ENST00000566901 A0A0U1RQJ8 604 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 O00370 1275 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 MTA2O94776 668 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 FTLP02792 175 aaPredicted RBP13.28□□□□□ -0.28
CFDP1-207ENST00000566901 AMHP03971 560 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 SETSIPP0DME0 302 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 CD19P15391 556 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 BRD2P25440 801 aaKnown RBP13.28□□□□□ -0.28
CFDP1-207ENST00000566901 NSFP46459 744 aaKnown RBP13.28□□□□□ -0.28
CFDP1-207ENST00000566901 RNASELQ05823 741 aaKnown RBP13.28□□□□□ -0.28
CFDP1-207ENST00000566901 RAB30Q15771 203 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
CFDP1-207ENST00000566901 ZNF394Q53GI3 561 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 LCLAT1Q6UWP7 414 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 CD300LGQ6UXG3 332 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 ZNF365Q70YC5 407 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 RHOT2Q8IXI1 618 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 MICALL1Q8N3F8 863 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 TMEM35BQ8NCS4 154 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 TRIM58Q8NG06 486 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 ATRIPQ8WXE1 791 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 TFAP2BQ92481 460 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 NOX5Q96PH1 765 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 FAM193BQ96PV7 902 aaPredicted RBP13.28□□□□□ -0.28
CFDP1-207ENST00000566901 ZSWIM1Q9BR11 485 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 PACSIN1Q9BY11 444 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 PDCL3Q9H2J4 239 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 TAS2R14Q9NYV8 317 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 GUCA1BQ9UMX6 200 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.28□□□□□ -0.28
CFDP1-207ENST00000566901 TCF20Q9UGU0 1960 aaKnown RBP13.28□□□□□ -0.28
CFDP1-207ENST00000566901 COL4A6Q14031 1691 aa13.28□□□□□ -0.28
CFDP1-207ENST00000566901 ZBBXA8MT70 800 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 A8MXQ7 604 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 B3GAT3O94766 335 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 DDHD2O94830 711 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 PCSK1P29120 753 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 GNL1P36915 607 aaPredicted RBP13.27□□□□□ -0.29
CFDP1-207ENST00000566901 GSCP56915 257 aaPredicted RBP13.27□□□□□ -0.29
CFDP1-207ENST00000566901 GNG11P61952 73 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 GPC5P78333 572 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 TIGD5Q53EQ6 642 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 DSTYKQ6XUX3 929 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 MON1BQ7L1V2 547 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 MSANTD4Q8NCY6 345 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 OR6B3Q8NGW1 331 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 ALS2CR12Q96Q35 445 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 PAAF1Q9BRP4 392 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 NKX2-4Q9H2Z4 354 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 THEGQ9P2T0 379 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 UVRAGQ9P2Y5 699 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 TRIM10Q9UDY6 481 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 PUF60Q9UHX1 559 aaKnown RBP13.27□□□□□ -0.29
CFDP1-207ENST00000566901 PCDHGC5Q9Y5F6 944 aa13.27□□□□□ -0.29
CFDP1-207ENST00000566901 FNDC1Q4ZHG4 1894 aaPredicted RBP13.27□□□□□ -0.29
CFDP1-207ENST00000566901 TNFRSF10AO00220 468 aa13.26□□□□□ -0.29
CFDP1-207ENST00000566901 SYN3O14994 580 aa13.26□□□□□ -0.29
CFDP1-207ENST00000566901 TRAPPC3O43617 180 aa13.26□□□□□ -0.29
CFDP1-207ENST00000566901 B4GALT3O60512 393 aa13.26□□□□□ -0.29
CFDP1-207ENST00000566901 DGKIO75912 1065 aa13.26□□□□□ -0.29
CFDP1-207ENST00000566901 KIF4AO95239 1232 aa13.26□□□□□ -0.29
CFDP1-207ENST00000566901 CYP1A2P05177 515 aa13.26□□□□□ -0.29
CFDP1-207ENST00000566901 CALB1P05937 261 aa13.26□□□□□ -0.29
CFDP1-207ENST00000566901 IBSPP21815 317 aaPredicted RBP13.26□□□□□ -0.29
CFDP1-207ENST00000566901 MMP8P22894 467 aa13.26□□□□□ -0.29
CFDP1-207ENST00000566901 WDR5P61964 334 aaKnown RBP13.26□□□□□ -0.29
CFDP1-207ENST00000566901 ELAVL2Q12926 359 aaKnown RBP13.26□□□□□ -0.29
CFDP1-207ENST00000566901 NAA35Q5VZE5 725 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms