RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 ARRDC1-AS1Q9H2J1 176 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 IKZF4Q9H2S9 585 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 TMLHEQ9NVH6 421 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 MAGED2Q9UNF1 606 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 SLC8A2Q9UPR5 921 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 TCHHQ07283 1943 aa12.49□□□□□ -0.41
NSMCE1-209ENST00000565384 CCDC163A0A0D9SF12 145 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 TRDMT1O14717 391 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 RNF40O75150 1001 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 PRPF40AO75400 957 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 EGFP01133 1207 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 CSH1P0DML2 217 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 CSH2P0DML3 217 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 ARSAP15289 507 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 RAP1GAPP47736 663 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 LIMK1P53667 647 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 TSPY1Q01534 308 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 SF3A2Q15428 464 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 NFE2Q16621 373 aaPredicted RBP12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 ST3GAL2Q16842 350 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 SDHAF4Q5VUM1 108 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 CC2D1AQ6P1N0 951 aaPredicted RBP12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 ZNF720Q7Z2F6 126 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 KBTBD6Q86V97 674 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 SFR1Q86XK3 245 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 NT5DC4Q86YG4 428 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 RIN3Q8TB24 985 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 LEO1Q8WVC0 666 aaPredicted RBP12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 MRPS31Q92665 395 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 HVCN1Q96D96 273 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 TDP1Q9NUW8 608 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 WDR87Q6ZQQ6 2873 aa12.48□□□□□ -0.41
NSMCE1-209ENST00000565384 GREB1Q4ZG55 1949 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 OBSL1O75147 1896 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 SOBPA7XYQ1 873 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 TULP1O00294 542 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 TADA3O75528 432 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 PPP1R37O75864 691 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 IL18RAPO95256 599 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 CD2BP2O95400 341 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 ZNF806P0C7X5 589 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 ADSSP30520 456 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 POLR2BP30876 1174 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 DDIT3P35638 169 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 PNPLA4P41247 253 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 WNT7BP56706 349 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 TFAMQ00059 246 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 AMPD2Q01433 879 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 ZNF268Q14587 947 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 MTF1Q14872 753 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 POSTNQ15063 836 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 PDGFRLQ15198 375 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 SF3A1Q15459 793 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 DYMQ7RTS9 669 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 MON1AQ86VX9 555 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 PDCL2Q8N4E4 241 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 HHIPQ96QV1 700 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 FBRSL1Q9HCM7 1045 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 RXFP3Q9NSD7 469 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 POLR3BQ9NW08 1133 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 DDX43Q9NXZ2 648 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 UXTQ9UBK9 157 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 SMC3Q9UQE7 1217 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 RALGAPA1Q6GYQ0 2036 aa12.47□□□□□ -0.41
NSMCE1-209ENST00000565384 AKAP3O75969 853 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 NOL4O94818 638 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 ITGB3P05106 788 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 DRD1P21728 446 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 ACAT1P24752 427 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 GJA4P35212 333 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 GALK1P51570 392 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 RPL10AP62906 217 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 FAM160A1Q05DH4 1040 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 KCNA1Q09470 495 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 DDR2Q16832 855 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 INTS6LQ5JSJ4 861 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 LARP1BQ659C4 914 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 NAIF1Q69YI7 327 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 BRAPQ7Z569 592 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 BRSK2Q8IWQ3 736 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 CAMKK1Q8N5S9 505 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 C1orf127Q8N9H9 656 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 SAAL1Q96ER3 474 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 CHAMP1Q96JM3 812 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 P2RY13Q9BPV8 354 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 ACBD6Q9BR61 282 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 FAM213AQ9BRX8 229 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 STRA6Q9BX79 667 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 SMOC1Q9H4F8 434 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 ABCB6Q9NP58 842 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 L1RE1Q9UN81 338 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 AGAP1Q9UPQ3 857 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 EXOC7Q9UPT5 735 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 PCDHGA5Q9Y5G8 931 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 CACNA1BQ00975 2339 aa12.46□□□□□ -0.41
NSMCE1-209ENST00000565384 DENND4CQ5VZ89 1909 aa12.46□□□□□ -0.42
NSMCE1-209ENST00000565384 TM4SF5O14894 197 aa12.45□□□□□ -0.42
NSMCE1-209ENST00000565384 HUS1O60921 280 aa12.45□□□□□ -0.42
NSMCE1-209ENST00000565384 CYP2F1P24903 491 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms