RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 FAM187BQ17R55 369 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 ZBTB41Q5SVQ8 909 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 SPOPLQ6IQ16 392 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 PLEKHA7Q6IQ23 1121 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 MOB2Q70IA6 237 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 RBBP8NLQ8NC74 664 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 GPRC5AQ8NFJ5 357 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 ZNF606Q8WXB4 792 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 SLC39A7Q92504 469 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 EDEM1Q92611 657 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 SLC10A4Q96EP9 437 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 FMO2Q99518 471 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 CELF4Q9BZC1 486 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 PPCSQ9HAB8 311 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 ERVK-5Q9HDB9 667 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 VTA1Q9NP79 307 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 HOMER3Q9NSC5 361 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 ADAM22Q9P0K1 906 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 TNFSF13BQ9Y275 285 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 NUB1Q9Y5A7 615 aa7.7□□□□□ -1.18
HERPUD1-209ENST00000564678 MROH7Q68CQ1 1323 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 IQCA1LA6NCM1 817 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 GLTPD2A6NH11 291 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 H0YGN5 161 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 PPFIA2O75334 1257 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 PROSCO94903 275 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 IL18RAPO95256 599 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 LSM8O95777 96 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 CST3P01034 146 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 USP17L7P0C7H9 530 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 RRM1P23921 792 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 COILP38432 576 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 RAB27AP51159 221 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 USP4Q13107 963 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 TRPC3Q13507 836 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 KYAT1Q16773 422 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ATF7IP2Q5U623 682 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 NAA35Q5VZE5 725 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 EFCAB12Q6NXP0 572 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 CCDC137Q6PK04 289 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 CCDC81Q6ZN84 652 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 SYDE1Q6ZW31 735 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 TMC3Q7Z5M5 1100 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 PNMA8AQ86V59 439 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 RHPN2Q8IUC4 686 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 FBXO16Q8IX29 292 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 CPA5Q8WXQ8 436 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ARL8AQ96BM9 186 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ANKRD36BP1Q96IX9 119 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 TRIM56Q9BRZ2 755 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 R3HDMLQ9H3Y0 253 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 PLEKHA4Q9H4M7 779 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 FAM124BQ9H5Z6 455 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 TMBIM4Q9HC24 238 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 PARVAQ9NVD7 372 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 PRMT7Q9NVM4 692 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 PLAAQ9Y263 795 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 NFS1Q9Y697 457 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 COL1A2P08123 1366 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ERICH4A6NGS2 130 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 SMAD7O15105 426 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 THAP12O43422 761 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 PSTPIP1O43586 416 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 GH1P01241 217 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 KRT14P02533 472 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 TNNC2P02585 160 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 PDGFAP04085 211 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 CALB1P05937 261 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 MYZAPP0CAP1 466 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 CETN2P41208 172 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 TNFSF9P41273 254 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 GCLCP48506 637 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 MARCKSL1P49006 195 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 EPHA4P54764 986 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 TNFAIP2Q03169 654 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 TAP1Q03518 808 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 SIX1Q15475 284 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ZNF792Q3KQV3 632 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 TTMPQ5BVD1 217 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ARSIQ5FYB1 569 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ARMCX2Q7L311 632 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 CROCCP2Q86T23 111 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ETFBKMTQ8IXQ9 262 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 LRRC71Q8N4P6 559 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ARFGAP2Q8N6H7 521 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 BTBD6Q96KE9 485 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ATP6V1G3Q96LB4 118 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 CAPS2Q9BXY5 557 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 TXLNGYQ9BZA5 131 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 NEUROG2Q9H2A3 272 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 ZDHHC18Q9NUE0 388 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 MTRF1LQ9UGC7 380 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 PRKAG3Q9UGI9 489 aa7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 CHORDC1Q9UHD1 332 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-209ENST00000564678 SCN4AP35499 1836 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 MCM3APO60318 1980 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 INO80B-WBP1J3KQ70 363 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 ASMTLO95671 621 aa7.68□□□□□ -1.18
HERPUD1-209ENST00000564678 HOXC6P09630 235 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms