RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TNNC2P02585 160 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 F11P03951 625 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 OTOGLQ3ZCN5 2332 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 INTS6LQ5JSJ4 861 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 ERMP1Q7Z2K6 904 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 LIMS2Q7Z4I7 341 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 CMTM8Q8IZV2 173 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 SPEM1Q8N4L4 309 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 RSPRY1Q96DX4 576 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 FUBP3Q96I24 572 aaKnown RBP eCLIP13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 LPIN3Q9BQK8 851 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 SLC46A2Q9BY10 475 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 PCIF1Q9H4Z3 704 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 PDE11AQ9HCR9 933 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 TFIP11Q9UBB9 837 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 CFAP45Q9UL16 551 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 L1RE1Q9UN81 338 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 UBE4BO95155 1302 aa13.09□□□□□ -0.31
GTF3C1-204ENST00000564664 PVALEFA0A1B0GWK0 134 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 GOLGA8IPA6NC78 632 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 GOLGA8JA6NMD2 632 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 KRT19P08727 400 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 HMGA1P17096 107 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 CCNE1P24864 410 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 AVPR1AP37288 418 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 MAGEA11P43364 429 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 ID4P47928 161 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 CXCL12P48061 93 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 NLRP12P59046 1061 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 ASIC1P78348 528 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 AMPD2Q01433 879 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 BFSP1Q12934 665 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 ZNF268Q14587 947 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 MAPRE1Q15691 268 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 CFAP221Q4G0U5 840 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 STXBP5Q5T5C0 1151 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 FAM171BQ6P995 826 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 UNC13DQ70J99 1090 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 EPM2AIP1Q7L775 607 aaPredicted RBP13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 MON1AQ86VX9 555 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 WDR49Q8IV35 697 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 ZSWIM2Q8NEG5 633 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 GIPC2Q8TF65 315 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 MRPS31Q92665 395 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 DHX58Q96C10 678 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 TRMT2BQ96GJ1 504 aaKnown RBP13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 MYRFLQ96LU7 910 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 PI4K2AQ9BTU6 479 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 EPC1Q9H2F5 836 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 KIF9Q9HAQ2 790 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 HSPBP1Q9NZL4 362 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 SIX4Q9UIU6 781 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 SNX9Q9Y5X1 595 aa13.08□□□□□ -0.32
GTF3C1-204ENST00000564664 TCHHQ07283 1943 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 SPECC1L-ADORA2AF8WAN1 911 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 NOL4O94818 638 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 PAPSS2O95340 614 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 HSP90AA1P07900 732 aaKnown RBP13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 ZSCAN22P10073 491 aaPredicted RBP13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 SDHBP21912 280 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 CNR2P34972 360 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 WNT7BP56706 349 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 SOWAHAQ2M3V2 549 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 ITPRIPL2Q3MIP1 535 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 FAM26FQ5R3K3 315 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 SHC4Q6S5L8 630 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 C4orf50Q6ZRC1 276 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 ADGRF2Q8IZF7 708 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 EXOC4Q96A65 974 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 HPDLQ96IR7 371 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 LRRC3BQ96PB8 259 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 PKMYT1Q99640 499 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 HINFPQ9BQA5 517 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 FGFBP2Q9BYJ0 223 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 MTMR12Q9C0I1 747 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 TDP1Q9NUW8 608 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 TMLHEQ9NVH6 421 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 EHD2Q9NZN4 543 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 CDH9Q9ULB4 789 aa13.07□□□□□ -0.32
GTF3C1-204ENST00000564664 PATJQ8NI35 1801 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 POLR2DO15514 142 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 TDGF1P13385 188 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 PFKLP17858 780 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 CYP2F1P24903 491 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 HOXA6P31267 233 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 CTHP32929 405 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 HOXD13P35453 343 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 PDE6CP51160 858 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 EHHADHQ08426 723 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 SNRNP35Q16560 246 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 VSTM1Q6UX27 236 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 HS2ST1Q7LGA3 356 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 TMEM150AQ86TG1 271 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 SPATA2LQ8IUW3 424 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 FSIP1Q8NA03 581 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 XXYLT1Q8NBI6 393 aa13.06□□□□□ -0.32
GTF3C1-204ENST00000564664 GOLGA5Q8TBA6 731 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms