RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 ENTPD2Q9Y5L3 495 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 RAD54BQ9Y620 910 aa3.9□□□□□ -1.79
CHD9-211ENST00000564600 FER1L4A9Z1Z3 1794 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 PRPF3O43395 683 aaKnown RBP3.89□□□□□ -1.79
CHD9-211ENST00000564600 NR2F6P10588 404 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
CHD9-211ENST00000564600 NHLH1Q02575 133 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 ITIH3Q06033 890 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 NBPF8Q3BBV2 869 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 CCDC157Q569K6 752 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 IFIT1BQ5T764 474 aaKnown RBP3.89□□□□□ -1.79
CHD9-211ENST00000564600 EMC10Q5UCC4 262 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 FAM160B1Q5W0V3 765 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 ZNF788Q6ZQV5 615 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 RASAL3Q86YV0 1011 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 CAMKK1Q8N5S9 505 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 KLHDC4Q8TBB5 520 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 DPF1Q92782 380 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 MRGPRX1Q96LB2 322 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 MAP3K14Q99558 947 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 ACO2Q99798 780 aaKnown RBP3.89□□□□□ -1.79
CHD9-211ENST00000564600 KMT5AQ9NQR1 393 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 GABBR1Q9UBS5 961 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 HESX1Q9UBX0 185 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 ZNF180Q9UJW8 692 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 AOX1Q06278 1338 aa3.89□□□□□ -1.79
CHD9-211ENST00000564600 TRIAP1O43715 76 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 OFD1O75665 1012 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 NCLP19338 710 aaKnown RBP3.88□□□□□ -1.79
CHD9-211ENST00000564600 ITGALP20701 1170 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 CD6P30203 668 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 LIPAP38571 399 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 NXPH1P58417 271 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 LILRA4P59901 499 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 ANAPC15P60006 121 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 RAB1AP62820 205 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 LRRC41Q15345 812 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 TBCCQ15814 346 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 KHDC1LQ5JSQ8 128 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 EPM2AIP1Q7L775 607 aaPredicted RBP3.88□□□□□ -1.79
CHD9-211ENST00000564600 MAVSQ7Z434 540 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 C1QL2Q7Z5L3 287 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 ZNF280BQ86YH2 543 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 ANKS1AQ92625 1134 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 FKBP10Q96AY3 582 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 SARAFQ96BY9 339 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 FAM136AQ96C01 138 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 PBKQ96KB5 322 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 P2RX7Q99572 595 aaKnown RBP3.88□□□□□ -1.79
CHD9-211ENST00000564600 HEPHQ9BQS7 1158 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 TYW1Q9NV66 732 aaKnown RBP3.88□□□□□ -1.79
CHD9-211ENST00000564600 CPA4Q9UI42 421 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 SERTAD3Q9UJW9 196 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 SSX2IPQ9Y2D8 614 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 STXBP5LQ9Y2K9 1186 aa3.88□□□□□ -1.79
CHD9-211ENST00000564600 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.88□□□□□ -1.79
CHD9-211ENST00000564600 CCDC151A5D8V7 595 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 MANSC4A6NHS7 340 aaPredicted RBP3.87□□□□□ -1.79
CHD9-211ENST00000564600 hCG_1984214I3L0E3 225 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 IKBKBO14920 756 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 URI1O94763 535 aaPredicted RBP3.87□□□□□ -1.79
CHD9-211ENST00000564600 GNAI2P04899 355 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 WT1P19544 449 aaPredicted RBP3.87□□□□□ -1.79
CHD9-211ENST00000564600 CTGFP29279 349 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 TFF2Q03403 129 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 Q8N9P0 234 aaPredicted RBP3.87□□□□□ -1.79
CHD9-211ENST00000564600 SLC35G2Q8TBE7 412 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 BRIX1Q8TDN6 353 aaKnown RBP3.87□□□□□ -1.79
CHD9-211ENST00000564600 WASF1Q92558 559 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 ZBTB9Q96C00 473 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 C1GALT1C1Q96EU7 318 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 CDK5RAP3Q96JB5 506 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 FAM167AQ96KS9 214 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 TAAR9Q96RI9 348 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 CDH19Q9H159 772 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 ZIM2Q9NZV7 527 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 SERGEFQ9UGK8 458 aa3.87□□□□□ -1.79
CHD9-211ENST00000564600 MRPS17Q9Y2R5 130 aaKnown RBP3.87□□□□□ -1.79
CHD9-211ENST00000564600 A0A088AWK7 358 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 ZNF213O14771 459 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 UBXN7O94888 489 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 GRPP07492 148 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 CT47B1P0C2W7 299 aaPredicted RBP3.86□□□□□ -1.79
CHD9-211ENST00000564600 EBLN1P0CF75 366 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 NHLRC4P0CG21 123 aaPredicted RBP3.86□□□□□ -1.79
CHD9-211ENST00000564600 NPR1P16066 1061 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 ZFXP17010 805 aaPredicted RBP3.86□□□□□ -1.79
CHD9-211ENST00000564600 GPD1P21695 349 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 DRD4P21917 467 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 HTR1BP28222 390 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 CLCN2P51788 898 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 UCP3P55916 312 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 IGBP1P78318 339 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 GPR162Q16538 588 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 ZIK1Q3SY52 487 aaPredicted RBP3.86□□□□□ -1.79
CHD9-211ENST00000564600 LONRF3Q496Y0 759 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 SWSAP1Q6NVH7 229 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 GRASPQ7Z6J2 395 aaPredicted RBP3.86□□□□□ -1.79
CHD9-211ENST00000564600 ZBTB34Q8NCN2 500 aa3.86□□□□□ -1.79
CHD9-211ENST00000564600 HAPLN3Q96S86 360 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms