RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 MRE11P49959 708 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 PSMC1P62191 440 aaKnown RBP21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 GPR158Q5T848 1215 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 SDHAF4Q5VUM1 108 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 PJA1Q8NG27 643 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 RSPRY1Q96DX4 576 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 SHDQ96IW2 340 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 MMS19Q96T76 1030 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 GPR88Q9GZN0 384 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 TRPV4Q9HBA0 871 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 HEBP1Q9NRV9 189 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 DMAC2Q9NW81 257 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 COL4A2P08572 1712 aa21.41■■□□□ 1.02
SHCBP1-203ENST00000564272 MYBPHLA2RUH7 354 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 HEPACAM2A8MVW5 462 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 ATP2C2O75185 946 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 ZNF202O95125 648 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 FGF19O95750 216 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 NR3C1P04150 777 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 CYP2F1P24903 491 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 LMO2P25791 158 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 PRKCQQ04759 706 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 TAF12Q16514 161 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 TPRG1Q6ZUI0 275 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 DPH6Q7L8W6 267 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 SLC9A9Q8IVB4 645 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 SYT15Q9BQS2 421 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 DDX23Q9BUQ8 820 aaKnown RBP21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 TRMT61BQ9BVS5 477 aaKnown RBP21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 BRD9Q9H8M2 597 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 SIT1Q9Y3P8 196 aa21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 NUP210Q8TEM1 1887 aaPredicted RBP21.4■■□□□ 1.02
SHCBP1-203ENST00000564272 MIA3Q5JRA6 1907 aa21.39■■□□□ 1.02
SHCBP1-203ENST00000564272 KANSL1LA0AUZ9 987 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 LRRIQ3A6PVS8 624 aaPredicted RBP21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 PDXKO00764 312 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 RHOBTB3O94955 611 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 PSMC3P17980 439 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 CD72P21854 359 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 WARSP23381 471 aaKnown RBP21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 CDC25CP30307 473 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 GDI1P31150 447 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 MYL6P60660 151 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 DDR2Q16832 855 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 ARHGAP15Q53QZ3 475 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 DEPDC1BQ8WUY9 529 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 DNASE1L2Q92874 299 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 CCDC47Q96A33 483 aaKnown RBP21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 GCNAQ96QF7 691 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 MRPL45Q9BRJ2 306 aaKnown RBP21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 IRF2BPLQ9H1B7 796 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 ABCB6Q9NP58 842 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 DLGAP2Q9P1A6 1054 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 MAPK8IP1Q9UQF2 711 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 MTF2Q9Y483 593 aaPredicted RBP21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 TICRRQ7Z2Z1 1910 aa21.39■■□□□ 1.01
SHCBP1-203ENST00000564272 PRAMEF12O95522 483 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 PDGFRBP09619 1106 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 GLULP15104 373 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 HMGA1P17096 107 aaKnown RBP21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 TNNC1P63316 161 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 NUCB2P80303 420 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 TRPC3Q13507 836 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 UBXN2BQ14CS0 331 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 ANGPT1Q15389 498 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 TDRD10Q5VZ19 366 aaKnown RBP21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 SPATA2LQ8IUW3 424 aaPredicted RBP21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 ARID3BQ8IVW6 561 aaPredicted RBP21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 PARD3BQ8TEW8 1205 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 CRTAC1Q9NQ79 661 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 CDH9Q9ULB4 789 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 MAGED2Q9UNF1 606 aaPredicted RBP21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 NME7Q9Y5B8 376 aa21.38■■□□□ 1.01
SHCBP1-203ENST00000564272 OBSL1O75147 1896 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 PHACTR2O75167 634 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 DLG4P78352 724 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 BIRC3Q13489 604 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 WDR72Q3MJ13 1102 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 CFAP221Q4G0U5 840 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 FAM171BQ6P995 826 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 TMEM150AQ86TG1 271 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 MFSD6LQ8IWD5 586 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 TMEM174Q8WUU8 243 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 MYLPFQ96A32 169 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 ELMO3Q96BJ8 720 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 XYLT2Q9H1B5 865 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 TASP1Q9H6P5 420 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 LTB4R2Q9NPC1 389 aa21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 NXF1Q9UBU9 619 aaKnown RBP21.37■■□□□ 1.01
SHCBP1-203ENST00000564272 SHISA7A6NL88 538 aa21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 CALUO43852 315 aaPredicted RBP21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 CSH1P0DML2 217 aa21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 CSH2P0DML3 217 aa21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 NLRP12P59046 1061 aa21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 RPL10AP62906 217 aaKnown RBP21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 CEP135Q66GS9 1140 aa21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 SCN4BQ8IWT1 228 aa21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 IRF7Q92985 503 aa21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 E2F7Q96AV8 911 aa21.36■■□□□ 1.01
SHCBP1-203ENST00000564272 FUBP3Q96I24 572 aaKnown RBP eCLIP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms