RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 SPATA2LQ8IUW3 424 aaPredicted RBP32.91■■■□□ 2.86
CMTM4-204ENST00000563952 PLA2G2FQ9BZM2 168 aa32.91■■■□□ 2.86
CMTM4-204ENST00000563952 XYLT2Q9H1B5 865 aa32.91■■■□□ 2.86
CMTM4-204ENST00000563952 CDH9Q9ULB4 789 aa32.91■■■□□ 2.86
CMTM4-204ENST00000563952 KINO60870 393 aaKnown RBP32.9■■■□□ 2.86
CMTM4-204ENST00000563952 AKAP3O75969 853 aa32.9■■■□□ 2.86
CMTM4-204ENST00000563952 STAU1O95793 577 aaKnown RBP32.9■■■□□ 2.86
CMTM4-204ENST00000563952 C4BPAP04003 597 aaKnown RBP32.9■■■□□ 2.86
CMTM4-204ENST00000563952 CYP2F1P24903 491 aa32.9■■■□□ 2.86
CMTM4-204ENST00000563952 ADAM9Q13443 819 aa32.9■■■□□ 2.86
CMTM4-204ENST00000563952 NCOA4Q13772 614 aa32.9■■■□□ 2.86
CMTM4-204ENST00000563952 IER5LQ5T953 404 aa32.9■■■□□ 2.86
CMTM4-204ENST00000563952 ZNF658Q5TYW1 1059 aaPredicted RBP32.9■■■□□ 2.86
CMTM4-204ENST00000563952 ASB16Q96NS5 453 aa32.9■■■□□ 2.86
CMTM4-204ENST00000563952 ATXN3LQ9H3M9 355 aa32.9■■■□□ 2.86
CMTM4-204ENST00000563952 ABCB6Q9NP58 842 aa32.9■■■□□ 2.86
CMTM4-204ENST00000563952 KRBA1A5PL33 1030 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 FGF19O95750 216 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 FCARP24071 287 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 GABRR2P28476 465 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 GNL1P36915 607 aaPredicted RBP32.89■■■□□ 2.86
CMTM4-204ENST00000563952 ANP32AP39687 249 aaKnown RBP32.89■■■□□ 2.86
CMTM4-204ENST00000563952 PRCPP42785 496 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 VAMP7P51809 220 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 ZNF699Q32M78 642 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 ZCWPW2Q504Y3 356 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 GAREM2Q75VX8 874 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 FAM186BQ8IYM0 893 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 OR6B3Q8NGW1 331 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 ZSCAN18Q8TBC5 510 aaPredicted RBP32.89■■■□□ 2.86
CMTM4-204ENST00000563952 SMARCD2Q92925 531 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 ELSPBP1Q96BH3 223 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 ELMO3Q96BJ8 720 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 ZFP14Q9HCL3 533 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 CHMP5Q9NZZ3 219 aa32.89■■■□□ 2.86
CMTM4-204ENST00000563952 ARIH1Q9Y4X5 557 aaPredicted RBP32.89■■■□□ 2.86
CMTM4-204ENST00000563952 STK25O00506 426 aa32.88■■■□□ 2.85
CMTM4-204ENST00000563952 MAPK13O15264 365 aa32.88■■■□□ 2.85
CMTM4-204ENST00000563952 VNN1O95497 513 aa32.88■■■□□ 2.85
CMTM4-204ENST00000563952 SDHAF4Q5VUM1 108 aa32.88■■■□□ 2.85
CMTM4-204ENST00000563952 ASTLQ6HA08 431 aaPredicted RBP32.88■■■□□ 2.85
CMTM4-204ENST00000563952 STKLD1Q8NE28 680 aa32.88■■■□□ 2.85
CMTM4-204ENST00000563952 GPR88Q9GZN0 384 aa32.88■■■□□ 2.85
CMTM4-204ENST00000563952 CRTAC1Q9NQ79 661 aa32.88■■■□□ 2.85
CMTM4-204ENST00000563952 ZDBF2Q9HCK1 2354 aa32.88■■■□□ 2.85
CMTM4-204ENST00000563952 TACC1O75410 805 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 KRT13P13646 458 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 NPR3P17342 541 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 RFX1P22670 979 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 PSMC2P35998 433 aaKnown RBP32.87■■■□□ 2.85
CMTM4-204ENST00000563952 RPL10AP62906 217 aaKnown RBP32.87■■■□□ 2.85
CMTM4-204ENST00000563952 DDR2Q16832 855 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 EDRF1Q3B7T1 1238 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 ZNF667Q5HYK9 610 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 STXBP5Q5T5C0 1151 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 FAM171BQ6P995 826 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 INTS8Q75QN2 995 aaKnown RBP32.87■■■□□ 2.85
CMTM4-204ENST00000563952 SPATA20Q8TB22 786 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 EEF2KMTQ96G04 330 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 ARHGEF3Q9NR81 526 aa32.87■■■□□ 2.85
CMTM4-204ENST00000563952 IKBKBO14920 756 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 TRIM49P0CI25 452 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 TRIM49CP0CI26 452 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 ZACNQ401N2 412 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 ARHGAP15Q53QZ3 475 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 C1orf220Q5T0J3 134 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 CWF19L1Q69YN2 538 aaKnown RBP32.86■■■□□ 2.85
CMTM4-204ENST00000563952 C4orf50Q6ZRC1 276 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 SV2AQ7L0J3 742 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 SCN4BQ8IWT1 228 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 TMEM105Q8N8V8 129 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 MYLPFQ96A32 169 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 GCNAQ96QF7 691 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 KCNH6Q9H252 994 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 MAGED2Q9UNF1 606 aaPredicted RBP32.86■■■□□ 2.85
CMTM4-204ENST00000563952 NME7Q9Y5B8 376 aa32.86■■■□□ 2.85
CMTM4-204ENST00000563952 VIPR2P41587 438 aa32.85■■■□□ 2.85
CMTM4-204ENST00000563952 CYP27A1Q02318 531 aa32.85■■■□□ 2.85
CMTM4-204ENST00000563952 GRM2Q14416 872 aa32.85■■■□□ 2.85
CMTM4-204ENST00000563952 CFAP221Q4G0U5 840 aa32.85■■■□□ 2.85
CMTM4-204ENST00000563952 GPR158Q5T848 1215 aa32.85■■■□□ 2.85
CMTM4-204ENST00000563952 ISM2Q6H9L7 571 aa32.85■■■□□ 2.85
CMTM4-204ENST00000563952 SCARA5Q6ZMJ2 495 aa32.85■■■□□ 2.85
CMTM4-204ENST00000563952 FUBP3Q96I24 572 aaKnown RBP eCLIP32.85■■■□□ 2.85
CMTM4-204ENST00000563952 SMYD3Q9H7B4 428 aa32.85■■■□□ 2.85
CMTM4-204ENST00000563952 VRTNQ9H8Y1 702 aa32.85■■■□□ 2.85
CMTM4-204ENST00000563952 MAGEC2Q9UBF1 373 aaPredicted RBP32.85■■■□□ 2.85
CMTM4-204ENST00000563952 FAM163BP0C2L3 166 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 CDC25CP30307 473 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 PIK3CAP42336 1068 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 RAP1GAPP47736 663 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 CLCN5P51795 746 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 CYP4F8P98187 520 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 MAPRE1Q15691 268 aaKnown RBP32.84■■■□□ 2.85
CMTM4-204ENST00000563952 MDH1BQ5I0G3 518 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 GPIHBP1Q8IV16 184 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 TSG101Q99816 390 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 MMRN2Q9H8L6 949 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 TBC1D17Q9HA65 648 aa32.84■■■□□ 2.85
CMTM4-204ENST00000563952 IL21Q9HBE4 155 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms