RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 MYADML2A6NDP7 307 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 LRRC14BA6NHZ5 514 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 NT5C1B-RDH14C9J2C7 533 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 FOXN1O15353 648 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 RFPL1O75677 317 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 HKR1P10072 659 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 ITGAMP11215 1152 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 HSPA6P17066 643 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 PIK3CGP48736 1102 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 ATAT1Q5SQI0 421 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 VRK3Q8IV63 474 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 CHFRQ96EP1 664 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 C1GALT1C1Q96EU7 318 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 COQ10AQ96MF6 247 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 IMPG2Q9BZV3 1241 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 SIK2Q9H0K1 926 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 NMRK2Q9NPI5 230 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 LMBRD1Q9NUN5 540 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 ZIM2Q9NZV7 527 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 USP32Q8NFA0 1604 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 KIF1AQ12756 1690 aa6.14□□□□□ -1.43
LINC00254-201ENST00000563416 GCP02774 474 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 PRDX5P30044 214 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 MAP2K6P52564 334 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 FSTL1Q12841 308 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 CYP2A13Q16696 494 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.13□□□□□ -1.43
LINC00254-201ENST00000563416 CLNKQ7Z7G1 428 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 GRAMD1CQ8IYS0 662 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 SCAMP4Q969E2 229 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 CAVIN3Q969G5 261 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 FUBP1Q96AE4 644 aaKnown RBP6.13□□□□□ -1.43
LINC00254-201ENST00000563416 MTFMTQ96DP5 389 aaKnown RBP6.13□□□□□ -1.43
LINC00254-201ENST00000563416 CDK5RAP3Q96JB5 506 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 KLHL32Q96NJ5 620 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 TLR10Q9BXR5 811 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 PNPOQ9NVS9 261 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 HSFX1Q9UBD0 423 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 PACSIN3Q9UKS6 424 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 ZDHHC8Q9ULC8 765 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 LRPPRCP42704 1394 aaKnown RBP6.13□□□□□ -1.43
LINC00254-201ENST00000563416 MSH6P52701 1360 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 YTHDC2Q9H6S0 1430 aaKnown RBP6.13□□□□□ -1.43
LINC00254-201ENST00000563416 TOPAZ1Q8N9V7 1692 aa6.13□□□□□ -1.43
LINC00254-201ENST00000563416 MARF1Q9Y4F3 1742 aaKnown RBP6.13□□□□□ -1.43
LINC00254-201ENST00000563416 TOM1O60784 492 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 CHEK2O96017 543 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 EGR2P11161 476 aaPredicted RBP6.12□□□□□ -1.43
LINC00254-201ENST00000563416 TYRP14679 529 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 KCNA2P16389 499 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 FDXRP22570 491 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 TGM1P22735 817 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 VAV2P52735 878 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 GTF2H3Q13889 308 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 FAM135BQ49AJ0 1406 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 Q6YL49 198 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 CAMKK1Q8N5S9 505 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 SLC17A8Q8NDX2 589 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 TMIEQ8NEW7 156 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 BRIX1Q8TDN6 353 aaKnown RBP6.12□□□□□ -1.43
LINC00254-201ENST00000563416 ASB10Q8WXI3 467 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 ABCC11Q96J66 1382 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 SMOQ99835 787 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 RTFDC1Q9BY42 306 aaPredicted RBP6.12□□□□□ -1.43
LINC00254-201ENST00000563416 TOR3AQ9H497 397 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 SLAMF7Q9NQ25 335 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 TCEAL9Q9UHQ7 104 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 DMTF1Q9Y222 760 aa6.12□□□□□ -1.43
LINC00254-201ENST00000563416 MST1RQ04912 1400 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 TRGV11A0A075B6L2 103 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 PRAMEF33A0A0G2JMD5 474 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 CCDC195A0A1B0GUA6 201 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 A0A1W2PS29 197 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 CCDC78A2IDD5 438 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 GRID2IPA4D2P6 1211 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 H3BUI4 141 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 AP1G1O43747 822 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 PRAMEF10O60809 474 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 EIF5BO60841 1220 aaKnown RBP6.11□□□□□ -1.43
LINC00254-201ENST00000563416 GNAI2P04899 355 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 GJB1P08034 283 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 KRT4P19013 534 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 POU6F2P78424 691 aaPredicted RBP6.11□□□□□ -1.43
LINC00254-201ENST00000563416 PREPLQ4J6C6 727 aaPredicted RBP6.11□□□□□ -1.43
LINC00254-201ENST00000563416 HECTD2Q5U5R9 776 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 Q6ZPA2 131 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 FAM90A1Q86YD7 464 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 CFAP52Q8N1V2 620 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 SH2D3CQ8N5H7 860 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 PDPRQ8NCN5 879 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 TNPO1Q92973 898 aaKnown RBP6.11□□□□□ -1.43
LINC00254-201ENST00000563416 IKZF4Q9H2S9 585 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 SLC12A5Q9H2X9 1139 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 UNKLQ9H9P5 680 aaKnown RBP6.11□□□□□ -1.43
LINC00254-201ENST00000563416 SLC45A2Q9UMX9 530 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 STXBP5LQ9Y2K9 1186 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 THRAP3Q9Y2W1 955 aaKnown RBP6.11□□□□□ -1.43
LINC00254-201ENST00000563416 NR2E3Q9Y5X4 410 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 ABCA3Q99758 1704 aa6.11□□□□□ -1.43
LINC00254-201ENST00000563416 COL4A3Q01955 1670 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms