RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 POC1BQ8TC44 478 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 NMD3Q96D46 503 aaKnown RBP4□□□□□ -1.77
SHCBP1-202ENST00000563219 LRIG1Q96JA1 1093 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 MSLNLQ96KJ4 702 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 COQ10AQ96MF6 247 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 TRIB1Q96RU8 372 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 SMOQ99835 787 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 ZNF700Q9H0M5 742 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 SMURF2Q9HAU4 748 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 PTPRHQ9HD43 1115 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 RNF181Q9P0P0 153 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 RGS17Q9UGC6 210 aaPredicted RBP4□□□□□ -1.77
SHCBP1-202ENST00000563219 PHTF1Q9UMS5 762 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 TNFRSF18Q9Y5U5 241 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 EPN1Q9Y6I3 576 aaPredicted RBP4□□□□□ -1.77
SHCBP1-202ENST00000563219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4□□□□□ -1.77
SHCBP1-202ENST00000563219 AATKQ6ZMQ8 1374 aa4□□□□□ -1.77
SHCBP1-202ENST00000563219 A0A087WWL8 130 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 PIPSLA2A3N6 862 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 M0QYG6 137 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 BTN3A1O00481 513 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 KIAA0355O15063 1070 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 SUN1O94901 812 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 UNC5CO95185 931 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 KIF20AO95235 890 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 FOSP01100 380 aaPredicted RBP3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 VIPR2P41587 438 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 AVPR1BP47901 424 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 TRAPPC10P48553 1259 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 TOB1P50616 345 aaPredicted RBP3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 ANXA11P50995 505 aaKnown RBP3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 SUMO3P55854 103 aaPredicted RBP3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 FMO1Q01740 532 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 GUCY1B3Q02153 619 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 CYP2A13Q16696 494 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 STRIP1Q5VSL9 837 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 XRRA1Q6P2D8 792 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 CLNKQ7Z7G1 428 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 SRLQ86TD4 932 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 ADGRG3Q86Y34 549 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 CPEB3Q8NE35 698 aaKnown RBP3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 NTN5Q8WTR8 489 aaPredicted RBP3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 LINC00476Q8WZB0 136 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 MAML1Q92585 1016 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 PHKBQ93100 1093 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 ADAM2Q99965 735 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 SPATA5L1Q9BVQ7 753 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 KIAA1586Q9HCI6 787 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 MRPS18AQ9NVS2 196 aaKnown RBP3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 STK32BQ9NY57 414 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 PTGFRNQ9P2B2 879 aa3.99□□□□□ -1.77
SHCBP1-202ENST00000563219 PRAMEF33A0A0G2JMD5 474 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 TRIM43BA6NCK2 446 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 POLRMTO00411 1230 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 PRAMEF10O60809 474 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 EIF5BO60841 1220 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 ERN1O75460 977 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 SOAT2O75908 522 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 CDKL5O76039 1030 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 ZFPL1O95159 310 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 GRPP07492 148 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 BRAFP15056 766 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 DDX6P26196 483 aaKnown RBP eCLIP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 TM4SF4P48230 202 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 SLC11A2P49281 568 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 CLK3P49761 638 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 SEC24CP53992 1094 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 WNT3P56703 355 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 RESTQ13127 1097 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 SLC13A2Q13183 592 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 CTBP1Q13363 440 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 DYRK1AQ13627 763 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 HLXQ14774 488 aaPredicted RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 SPDYE7PQ495Y7 208 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 AMOTQ4VCS5 1084 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 LMBRD2Q68DH5 695 aaPredicted RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 SP5Q6BEB4 398 aaPredicted RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 C1orf228Q6PIY5 440 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 SESTD1Q86VW0 696 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 MICU3Q86XE3 530 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 SPICE1Q8N0Z3 855 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 PCSK9Q8NBP7 692 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 PSD4Q8NDX1 1056 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 NACC2Q96BF6 587 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 TRIM43Q96BQ3 446 aaPredicted RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 EVI5LQ96CN4 794 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 ZNF764Q96H86 408 aaPredicted RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 ZC3H10Q96K80 434 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 TNIP3Q96KP6 325 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 BBC3Q96PG8 261 aaPredicted RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 STRBPQ96SI9 672 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 TBCBQ99426 244 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 ELAC2Q9BQ52 826 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 HEPHQ9BQS7 1158 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 NAA15Q9BXJ9 866 aaKnown RBP3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 ALOXE3Q9BYJ1 711 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 ZNF518BQ9C0D4 1074 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 ZNF287Q9HBT7 754 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 GALNT9Q9HCQ5 603 aa3.98□□□□□ -1.77
SHCBP1-202ENST00000563219 FNIP2Q9P278 1114 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms