RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CDH9Q9ULB4 789 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 CIZ1Q9ULV3 898 aaPredicted RBP8.77□□□□□ -1.01
SNX1-207ENST00000559401 TRAF3IP3Q9Y228 551 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 ZNF638Q14966 1978 aaKnown RBP8.77□□□□□ -1.01
SNX1-207ENST00000559401 OBSL1O75147 1896 aa8.77□□□□□ -1.01
SNX1-207ENST00000559401 MIA3Q5JRA6 1907 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 TICRRQ7Z2Z1 1910 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ZDBF2Q9HCK1 2354 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 MYBPHLA2RUH7 354 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 KRBA1A5PL33 1030 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 A8MXQ7 604 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 NRG2O14511 850 aaPredicted RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 DPYSL4O14531 572 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 GABRDO14764 452 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ATP2C2O75185 946 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 MOSPD3O75425 235 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ECI2O75521 394 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 MICAL2O94851 1124 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 TRIM49P0CI25 452 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 TRIM49CP0CI26 452 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 P4HA1P13674 534 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 WARSP23381 471 aaKnown RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 LMO2P25791 158 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ANXA13P27216 316 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 CDC25CP30307 473 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 GNL1P36915 607 aaPredicted RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 PLA2G5P39877 138 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 VIPR2P41587 438 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 RAP1GAPP47736 663 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 GPR15P49685 360 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 VAMP7P51809 220 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 EPHA5P54756 1037 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 CYP4F8P98187 520 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 PFKPQ01813 784 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ADAM9Q13443 819 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 STIM1Q13586 685 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 NCOA4Q13772 614 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 MAPRE1Q15691 268 aaKnown RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 DDR2Q16832 855 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 MDH1BQ5I0G3 518 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 STXBP5Q5T5C0 1151 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 GPR158Q5T848 1215 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 IER5LQ5T953 404 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 TDRD10Q5VZ19 366 aaKnown RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 CWF19L1Q69YN2 538 aaKnown RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 ISM2Q6H9L7 571 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ASTLQ6HA08 431 aaPredicted RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 TANGO2Q6ICL3 276 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 INTS8Q75QN2 995 aaKnown RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 GPIHBP1Q8IV16 184 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 YAF2Q8IY57 180 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 TMEM105Q8N8V8 129 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ENGASEQ8NFI3 743 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 TMC2Q8TDI7 906 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 MYLPFQ96A32 169 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ELSPBP1Q96BH3 223 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ELMO3Q96BJ8 720 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 EEF2KMTQ96G04 330 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ZSWIM3Q96MP5 696 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 ASB16Q96NS5 453 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 GSDMAQ96QA5 445 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 PRRX2Q99811 253 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 TSG101Q99816 390 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 MRPL45Q9BRJ2 306 aaKnown RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 PLA2G2FQ9BZM2 168 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 IMPG2Q9BZV3 1241 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 GPR88Q9GZN0 384 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 GZF1Q9H116 711 aaPredicted RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 BRD9Q9H8M2 597 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 TBC1D17Q9HA65 648 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.76□□□□□ -1.01
SNX1-207ENST00000559401 SLC2A4RGQ9NR83 387 aa8.76□□□□□ -1.01
SNX1-207ENST00000559401 MAGEC2Q9UBF1 373 aaPredicted RBP8.76□□□□□ -1.01
SNX1-207ENST00000559401 COL4A3Q01955 1670 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 CETN3O15182 167 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 GADD45BO75293 160 aaPredicted RBP8.75□□□□□ -1.01
SNX1-207ENST00000559401 AKAP3O75969 853 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 CSH1P0DML2 217 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 CSH2P0DML3 217 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 AOC1P19801 751 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 FCARP24071 287 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 GDI1P31150 447 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 PSMC2P35998 433 aaKnown RBP8.75□□□□□ -1.01
SNX1-207ENST00000559401 CLCN5P51795 746 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 MLF2Q15773 248 aaPredicted RBP8.75□□□□□ -1.01
SNX1-207ENST00000559401 ZNF658Q5TYW1 1059 aaPredicted RBP8.75□□□□□ -1.01
SNX1-207ENST00000559401 TCERG1LQ5VWI1 586 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 POTEHQ6S545 545 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 VITQ6UXI7 678 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 TPRG1Q6ZUI0 275 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 GAREM2Q75VX8 874 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 TTC16Q8NEE8 873 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 PRSS33Q8NF86 280 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 DEPDC1BQ8WUY9 529 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 MRPS31Q92665 395 aaKnown RBP8.75□□□□□ -1.01
SNX1-207ENST00000559401 FUBP3Q96I24 572 aaKnown RBP eCLIP8.75□□□□□ -1.01
SNX1-207ENST00000559401 SHDQ96IW2 340 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 TIGD1Q96MW7 591 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 MED10Q9BTT4 135 aa8.75□□□□□ -1.01
SNX1-207ENST00000559401 TRMT61BQ9BVS5 477 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms