RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 HNRNPCP07910 306 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 VAV1P15498 845 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ATF7P17544 494 aaPredicted RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 NT5C2P49902 561 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ARSEP51690 589 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 SNAP25P60880 206 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ARHGAP4P98171 946 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 CDK16Q00536 496 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 LMNB2Q03252 620 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 CDC16Q13042 620 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 GPS1Q13098 491 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 EFTUD2Q15029 972 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 RASA2Q15283 850 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 BMT2Q1RMZ1 405 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 USH1GQ495M9 461 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 EPC2Q52LR7 807 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 NBPF12Q5TAG4 269 aaPredicted RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 RINT1Q6NUQ1 792 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ALYREFQ86V81 257 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 SCUBE1Q8IWY4 988 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 EPS8L1Q8TE68 723 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 PSPC1Q8WXF1 523 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 PPP2R3CQ969Q6 453 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 HAUS1Q96CS2 278 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 PTCD3Q96EY7 689 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 PLEKHG4BQ96PX9 1271 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 MKNK1Q9BUB5 465 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 RTFDC1Q9BY42 306 aaPredicted RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 TMEM117Q9H0C3 514 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 SMYD3Q9H7B4 428 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 UVRAGQ9P2Y5 699 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 MTO1Q9Y2Z2 717 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 KIAA1551Q9HCM1 1747 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 PIK3CDO00329 1044 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 STK10O94804 968 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 SLC10A3P09131 477 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 KITP10721 976 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ETS1P14921 441 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 LSAMPQ13449 338 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 PPP1R18Q6NYC8 613 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 RAPH1Q70E73 1250 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ZCCHC9Q8N567 271 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 CEP70Q8NHQ1 597 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 SLCO2A1Q92959 643 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 LENG1Q96BZ8 264 aaPredicted RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 MTBPQ96DY7 904 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 OXNAD1Q96HP4 312 aaPredicted RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 EIF2AK1Q9BQI3 630 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 IQCGQ9H095 443 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 RANBP17Q9H2T7 1088 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 SUDS3Q9H7L9 328 aaPredicted RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 CD209Q9NNX6 404 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 DDX18Q9NVP1 670 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 MTMR4Q9NYA4 1195 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 IL1RAPL1Q9NZN1 696 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 SLC17A7Q9P2U7 560 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 GTF3C4Q9UKN8 822 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 TAF1P21675 1872 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 COL4A1P02462 1669 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 FAM237BA0A1B0GVD1 139 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 TISP43B9A030 160 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 SPECC1L-ADORA2AF8WAN1 911 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 PI4K2BG5E9Z4 385 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 K7ENM7 598 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 LPXNO60711 386 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 OR6B1O95007 311 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 CYP1A2P05177 515 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ABHD2P08910 425 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 HARSP12081 509 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 AKR1B1P15121 316 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 BGNP21810 368 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 RFX1P22670 979 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 GCAP28676 217 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 CLK2P49760 499 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 VAMP7P51809 220 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 INHBCP55103 352 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ARL4CP56559 192 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 BPIFB4P59827 614 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ZNF543Q08ER8 600 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 TNFAIP1Q13829 316 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 MMEL1Q495T6 779 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 WDR78Q5VTH9 848 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 LLGL2Q6P1M3 1020 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 CENPUQ71F23 418 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 RBM12BQ8IXT5 1001 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ZNF398Q8TD17 642 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 SLC26A7Q8TE54 656 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 PYDC1Q8WXC3 89 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 AZIN2Q96A70 460 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 CCDC127Q96BQ5 260 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 RILPQ96NA2 401 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 NMUR2Q9GZQ4 415 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 KANSL3Q9P2N6 904 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 MARCOQ9UEW3 520 aaPredicted RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 IKBKGQ9Y6K9 419 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 SNED1Q8TER0 1413 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 CCL15-CCL14A0A0B4J2E2 113 aa5.31□□□□□ -1.56
HMG20A-204ENST00000558288 CCDC195A0A1B0GUA6 201 aa5.31□□□□□ -1.56
HMG20A-204ENST00000558288 GOLGA8IPA6NC78 632 aa5.31□□□□□ -1.56
HMG20A-204ENST00000558288 GOLGA8JA6NMD2 632 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms