RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ZNF197O14709 1029 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 DCXO43602 365 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 VNN1O95497 513 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 VNN2O95498 520 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 RHOP08100 348 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 BMP6P22004 513 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 PIK3CAP42336 1068 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 PAK1Q13153 545 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 MAPRE1Q15691 268 aaKnown RBP13.37□□□□□ -0.27
SLIRP-211ENST00000557623 MGAT5BQ3V5L5 792 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 C1orf220Q5T0J3 134 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 GET4Q7L5D6 327 aaPredicted RBP13.37□□□□□ -0.27
SLIRP-211ENST00000557623 FILIP1Q7Z7B0 1213 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 ITIH5Q86UX2 942 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 LRRTM3Q86VH5 581 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 OSTM1Q86WC4 334 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 CCDC150Q8NCX0 1101 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 SNX25Q9H3E2 840 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 METTL14Q9HCE5 456 aaKnown RBP13.37□□□□□ -0.27
SLIRP-211ENST00000557623 TMEM8AQ9HCN3 771 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 HCFC1R1Q9NWW0 138 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 EPS15L1Q9UBC2 864 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 NXF1Q9UBU9 619 aaKnown RBP13.37□□□□□ -0.27
SLIRP-211ENST00000557623 CDH9Q9ULB4 789 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 CTNND2Q9UQB3 1225 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 SLC27A5Q9Y2P5 690 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 ASB3Q9Y575 518 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 DENND4CQ5VZ89 1909 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 VCANP13611 3396 aa13.37□□□□□ -0.27
SLIRP-211ENST00000557623 C5orf42Q9H799 3197 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 FGFR1OPO95684 399 aaKnown RBP13.36□□□□□ -0.27
SLIRP-211ENST00000557623 HLA-DRAP01903 254 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 TRIM49P0CI25 452 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 TRIM49CP0CI26 452 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 ACAT1P24752 427 aaKnown RBP13.36□□□□□ -0.27
SLIRP-211ENST00000557623 GNL1P36915 607 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-211ENST00000557623 GCLMP48507 274 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 NTHL1P78549 312 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 PPP3CAQ08209 521 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 VEPH1Q14D04 833 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 CYP4A22Q5TCH4 519 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 KRT39Q6A163 491 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 TTI2Q6NXR4 508 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 C4orf50Q6ZRC1 276 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 PDZD4Q76G19 769 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-211ENST00000557623 OR6B3Q8NGW1 331 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 KBTBD7Q8WVZ9 684 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 NXPE3Q969Y0 559 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 EEF2KMTQ96G04 330 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 MYADMQ96S97 322 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 KCNK17Q96T54 332 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 SEPT5Q99719 369 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-211ENST00000557623 SYT15Q9BQS2 421 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 CORO1BQ9BR76 489 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 CRISPLD1Q9H336 500 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 MMRN2Q9H8L6 949 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 ABCB6Q9NP58 842 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 ASAH2Q9NR71 780 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 ABI2Q9NYB9 513 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-211ENST00000557623 IGSF9Q9P2J2 1179 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 LIMD1Q9UGP4 676 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 ARMCX3Q9UH62 379 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-211ENST00000557623 MUTYHQ9UIF7 546 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 CDH7Q9ULB5 785 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 MRPS23Q9Y3D9 190 aaKnown RBP13.36□□□□□ -0.27
SLIRP-211ENST00000557623 MYH10P35580 1976 aa13.36□□□□□ -0.27
SLIRP-211ENST00000557623 MICAL2O94851 1124 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 GNA14O95837 355 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 ASS1P00966 412 aaKnown RBP13.35□□□□□ -0.27
SLIRP-211ENST00000557623 HAPLN1P10915 354 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-211ENST00000557623 LAMP2P13473 410 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 MXI1P50539 228 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 PTPN21Q16825 1174 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 CCDC40Q4G0X9 1142 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 DCAF17Q5H9S7 520 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-211ENST00000557623 TCERG1LQ5VWI1 586 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 FAM171BQ6P995 826 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 FRMD5Q7Z6J6 570 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 SPATA2LQ8IUW3 424 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-211ENST00000557623 MLKLQ8NB16 471 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 FAM200AQ8TCP9 573 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 FUBP3Q96I24 572 aaKnown RBP eCLIP13.35□□□□□ -0.27
SLIRP-211ENST00000557623 DUSP9Q99956 384 aaKnown RBP13.35□□□□□ -0.27
SLIRP-211ENST00000557623 MRPL45Q9BRJ2 306 aaKnown RBP13.35□□□□□ -0.27
SLIRP-211ENST00000557623 C1QTNF1Q9BXJ1 281 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 ADAM33Q9BZ11 813 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 CEP72Q9P209 647 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 GTF3C4Q9UKN8 822 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 SORCS3Q9UPU3 1222 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 GREB1Q4ZG55 1949 aa13.35□□□□□ -0.27
SLIRP-211ENST00000557623 A8MXQ7 604 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 N4BP1O75113 896 aaKnown RBP13.34□□□□□ -0.27
SLIRP-211ENST00000557623 FGF19O95750 216 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 PDGFRBP09619 1106 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 TRIM21P19474 475 aaKnown RBP13.34□□□□□ -0.27
SLIRP-211ENST00000557623 LMO2P25791 158 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 EPHA5P54756 1037 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 STX17P56962 302 aa13.34□□□□□ -0.27
SLIRP-211ENST00000557623 RPL10AP62906 217 aaKnown RBP13.34□□□□□ -0.27
SLIRP-211ENST00000557623 LSM11P83369 360 aaKnown RBP eCLIP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms