RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 ECHS1P30084 290 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 TERF1P54274 439 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 LGALS4P56470 323 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 GEMIN4P57678 1058 aaKnown RBP4.02□□□□□ -1.77
FOXN3-217ENST00000557572 GPSM2P81274 684 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 ITKQ08881 620 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 FSCN1Q16658 493 aaKnown RBP4.02□□□□□ -1.77
FOXN3-217ENST00000557572 ANO4Q32M45 955 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 LVRNQ6Q4G3 990 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-217ENST00000557572 Q6ZVL8 140 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 C11orf74Q86VG3 221 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 LRRTM3Q86VH5 581 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 SKAP1Q86WV1 359 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 SMAP1Q8IYB5 467 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-217ENST00000557572 CLASRPQ8N2M8 674 aaKnown RBP4.02□□□□□ -1.77
FOXN3-217ENST00000557572 CCDC89Q8N998 374 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 VPS37AQ8NEZ2 397 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 PJA1Q8NG27 643 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 PRSS3P2Q8NHM4 247 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 JPH3Q8WXH2 748 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-217ENST00000557572 LPIN2Q92539 896 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 HOXB13Q92826 284 aaPredicted RBP4.02□□□□□ -1.77
FOXN3-217ENST00000557572 MTMR8Q96EF0 704 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 PGBD1Q96JS3 809 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 SARGQ9BW04 601 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 LRRC27Q9C0I9 530 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 SPTLC3Q9NUV7 552 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 SLC5A4Q9NY91 659 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 CLIC5Q9NZA1 410 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 HSFX1Q9UBD0 423 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 MAPRE3Q9UPY8 281 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 NEU2Q9Y3R4 380 aa4.02□□□□□ -1.77
FOXN3-217ENST00000557572 GABRDO14764 452 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 NBNO60934 754 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 RFPL1O75677 317 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 TTLL1O95922 423 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 VDRP11473 427 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 ALAS1P13196 640 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 HTR6P50406 440 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 NEK4P51957 841 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 GALEQ14376 348 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 SART3Q15020 963 aaKnown RBP4.01□□□□□ -1.77
FOXN3-217ENST00000557572 PRAMEF17Q5VTA0 474 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 TOGARAM2Q6ZUX3 1019 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 TPH2Q8IWU9 490 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 CPXCR1Q8N123 301 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 RIN2Q8WYP3 895 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-217ENST00000557572 CHMP4CQ96CF2 233 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 ERP27Q96DN0 273 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 RSPH9Q9H1X1 276 aaPredicted RBP4.01□□□□□ -1.77
FOXN3-217ENST00000557572 LANCL2Q9NS86 450 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 SAGE1Q9NXZ1 904 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 POLG2Q9UHN1 485 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 GTF2A1LQ9UNN4 478 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 SLC45A1Q9Y2W3 748 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 NOTCH3Q9UM47 2321 aa4.01□□□□□ -1.77
FOXN3-217ENST00000557572 LCHNA4D1U4 455 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 GOLGA6CA6NDK9 693 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 GOLGA6BA6NDN3 693 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 TISP43B9A030 160 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 hCG_1984214I3L0E3 225 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 TCERG1O14776 1098 aaKnown RBP4□□□□□ -1.77
FOXN3-217ENST00000557572 AKR1B10O60218 316 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 OAZ2O95190 189 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 FKBP9O95302 570 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 PTMAP06454 111 aaKnown RBP4□□□□□ -1.77
FOXN3-217ENST00000557572 NBPF7P0C2Y1 421 aaPredicted RBP4□□□□□ -1.77
FOXN3-217ENST00000557572 NHLRC4P0CG21 123 aaPredicted RBP4□□□□□ -1.77
FOXN3-217ENST00000557572 GOLGA6DP0CG33 693 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 ADCYAP1R1P41586 468 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 PPM1FP49593 454 aaPredicted RBP4□□□□□ -1.77
FOXN3-217ENST00000557572 KRTAP10-12P60413 245 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 MRPS9P82933 396 aaKnown RBP4□□□□□ -1.77
FOXN3-217ENST00000557572 TOMM20Q15388 145 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 CCDC96Q2M329 555 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 ALDH1L2Q3SY69 923 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 BROXQ5VW32 411 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 CNNM4Q6P4Q7 775 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 PDXDC1Q6P996 788 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 C16orf54Q6UWD8 224 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 FKBP9P1Q75LS8 142 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 NECAB2Q7Z6G3 386 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 MRPL10Q7Z7H8 261 aaKnown RBP4□□□□□ -1.77
FOXN3-217ENST00000557572 ZBTB46Q86UZ6 589 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 SLC5A5Q92911 643 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 TMEM125Q96AQ2 219 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 CYFIP2Q96F07 1278 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 GPR101Q96P66 508 aaPredicted RBP4□□□□□ -1.77
FOXN3-217ENST00000557572 ELAC2Q9BQ52 826 aaKnown RBP4□□□□□ -1.77
FOXN3-217ENST00000557572 HERPUD2Q9BSE4 406 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 SELENOOQ9BVL4 669 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 MS4A5Q9H3V2 200 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4□□□□□ -1.77
FOXN3-217ENST00000557572 IFT122Q9HBG6 1241 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 EMC7Q9NPA0 242 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 INTS13Q9NVM9 706 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 GOLGA6AQ9NYA3 693 aa4□□□□□ -1.77
FOXN3-217ENST00000557572 SH3BP4Q9P0V3 963 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms