RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 CMTM8Q8IZV2 173 aa15.93■□□□□ 0.14
CHD8-211ENST00000556833 USP13Q92995 863 aaPredicted RBP15.93■□□□□ 0.14
CHD8-211ENST00000556833 CLIC6Q96NY7 704 aa15.93■□□□□ 0.14
CHD8-211ENST00000556833 FGFBP2Q9BYJ0 223 aa15.93■□□□□ 0.14
CHD8-211ENST00000556833 ASB7Q9H672 318 aa15.93■□□□□ 0.14
CHD8-211ENST00000556833 MRPL44Q9H9J2 332 aaKnown RBP15.93■□□□□ 0.14
CHD8-211ENST00000556833 THG1LQ9NWX6 298 aaKnown RBP15.93■□□□□ 0.14
CHD8-211ENST00000556833 AGAP1Q9UPQ3 857 aa15.93■□□□□ 0.14
CHD8-211ENST00000556833 C2CD2Q9Y426 696 aa15.93■□□□□ 0.14
CHD8-211ENST00000556833 PCDHB5Q9Y5E4 795 aa15.93■□□□□ 0.14
CHD8-211ENST00000556833 ANAPC1Q9H1A4 1944 aa15.93■□□□□ 0.14
CHD8-211ENST00000556833 KIAA1549LQ6ZVL6 1849 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 GCNT3O95395 438 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 EGFP01133 1207 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 KRT19P08727 400 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 HMGA1P17096 107 aaKnown RBP15.92■□□□□ 0.14
CHD8-211ENST00000556833 CYP2F1P24903 491 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 CASP5P51878 434 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 MLLT6P55198 1093 aaPredicted RBP15.92■□□□□ 0.14
CHD8-211ENST00000556833 NLRP12P59046 1061 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 PLCB2Q00722 1185 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 TSPY1Q01534 308 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 AASDHQ4L235 1098 aaPredicted RBP15.92■□□□□ 0.14
CHD8-211ENST00000556833 SLFN12LQ6IEE8 588 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 DCP1BQ8IZD4 617 aaKnown RBP15.92■□□□□ 0.14
CHD8-211ENST00000556833 PDCL2Q8N4E4 241 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 SPPL2BQ8TCT7 592 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 NETO1Q8TDF5 533 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 CHFRQ96EP1 664 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 ZNF560Q96MR9 790 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 HHIPQ96QV1 700 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 TSPAN18Q96SJ8 248 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 ARRDC1-AS1Q9H2J1 176 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 PCIF1Q9H4Z3 704 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 OBP2AQ9NY56 170 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 L1RE1Q9UN81 338 aa15.92■□□□□ 0.14
CHD8-211ENST00000556833 HELZP42694 1942 aaKnown RBP15.92■□□□□ 0.14
CHD8-211ENST00000556833 KMT2BQ9UMN6 2715 aaPredicted RBP15.91■□□□□ 0.14
CHD8-211ENST00000556833 MYMKA6NI61 221 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 SLC26A4O43511 780 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 RNF40O75150 1001 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 F11P03951 625 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 CCDC192P0DO97 292 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 IDEP14735 1019 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 RUNX3Q13761 415 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 CSRP2Q16527 193 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 C1orf228Q6PIY5 440 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 ZNF720Q7Z2F6 126 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 KBTBD6Q86V97 674 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 WDR5BQ86VZ2 330 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 OSTM1Q86WC4 334 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 KCNN1Q92952 543 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 PANK2Q9BZ23 570 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 FBRSL1Q9HCM7 1045 aaKnown RBP15.91■□□□□ 0.14
CHD8-211ENST00000556833 RXFP3Q9NSD7 469 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 DDX43Q9NXZ2 648 aaKnown RBP15.91■□□□□ 0.14
CHD8-211ENST00000556833 HSFX1Q9UBD0 423 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 STYXL1Q9Y6J8 313 aa15.91■□□□□ 0.14
CHD8-211ENST00000556833 SLC30A4O14863 429 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 TADA3O75528 432 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 RPP40O75818 363 aaKnown RBP15.9■□□□□ 0.14
CHD8-211ENST00000556833 IL18RAPO95256 599 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 PAPSS2O95340 614 aaPredicted RBP15.9■□□□□ 0.14
CHD8-211ENST00000556833 GRSF1Q12849 480 aaKnown RBP eCLIP15.9■□□□□ 0.14
CHD8-211ENST00000556833 CC2D1AQ6P1N0 951 aaPredicted RBP15.9■□□□□ 0.14
CHD8-211ENST00000556833 BRAPQ7Z569 592 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 SCN4BQ8IWT1 228 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 SYCP3Q8IZU3 236 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 C1orf127Q8N9H9 656 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 C2orf15Q8WU43 125 aaKnown RBP15.9■□□□□ 0.14
CHD8-211ENST00000556833 MRPS31Q92665 395 aaKnown RBP15.9■□□□□ 0.14
CHD8-211ENST00000556833 SLC22A12Q96S37 553 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 CYP2S1Q96SQ9 504 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 FAM83CQ9BQN1 747 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 CBWD1Q9BRT8 395 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 TDP1Q9NUW8 608 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 RBAKQ9NYW8 714 aaPredicted RBP15.9■□□□□ 0.14
CHD8-211ENST00000556833 GTF3C4Q9UKN8 822 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 SLC8A2Q9UPR5 921 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 WNT6Q9Y6F9 365 aa15.9■□□□□ 0.14
CHD8-211ENST00000556833 PPP1R37O75864 691 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 BMP15O95972 392 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 ADRB1P08588 477 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 SCP2P22307 547 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 PSMD2Q13200 908 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 TMEM196Q5HYL7 178 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 L1TD1Q5T7N2 865 aaKnown RBP15.89■□□□□ 0.13
CHD8-211ENST00000556833 RRAGBQ5VZM2 374 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 BRSK2Q8IWQ3 736 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 CSGALNACT2Q8N6G5 542 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 ACCSQ96QU6 501 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 MTMR12Q9C0I1 747 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 CCSER1Q9C0I3 900 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 PDE11AQ9HCR9 933 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 CCDC39Q9UFE4 941 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 FBXO2Q9UK22 296 aaPredicted RBP15.89■□□□□ 0.13
CHD8-211ENST00000556833 INVSQ9Y283 1065 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.89■□□□□ 0.13
CHD8-211ENST00000556833 SNX9Q9Y5X1 595 aa15.89■□□□□ 0.13
CHD8-211ENST00000556833 SCAMP3O14828 347 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms