RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 VEPH1Q14D04 833 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 CFAP221Q4G0U5 840 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 FAM171BQ6P995 826 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 RBM43Q6ZSC3 357 aaKnown RBP11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 GRASPQ7Z6J2 395 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 ITIH5Q86UX2 942 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 LRRTM3Q86VH5 581 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 OSTM1Q86WC4 334 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 TTC39CQ8N584 583 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 ATAD1Q8NBU5 361 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 NXPE3Q969Y0 559 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 SLC35C1Q96A29 364 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 TNIP3Q96KP6 325 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 CEP295NLQ96MC4 621 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 ZNF512Q96ME7 567 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 PKMYT1Q99640 499 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 SYT15Q9BQS2 421 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 NIF3L1Q9GZT8 377 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 MMRN2Q9H8L6 949 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 CYP3A43Q9HB55 503 aa11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 ABI2Q9NYB9 513 aaPredicted RBP11.29□□□□□ -0.6
MTHFD1-214ENST00000556771 A8MXQ7 604 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 C2CD4DB7Z1M9 353 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 FGF19O95750 216 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 HAPLN1P10915 354 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 ALADP13716 330 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 MAGEA11P43364 429 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 EPHA5P54756 1037 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 STX17P56962 302 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 RPL10AP62906 217 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 TPD52L1Q16890 204 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 MGAT5BQ3V5L5 792 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 WDR44Q5JSH3 913 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 CYP4A22Q5TCH4 519 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 UNC93AQ86WB7 457 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 RNF135Q8IUD6 432 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 SPATA2LQ8IUW3 424 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 FAM114A1Q8IWE2 563 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 OR6B3Q8NGW1 331 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 TAS1R2Q8TE23 839 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 SEPT5Q99719 369 aaPredicted RBP11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 MRPL45Q9BRJ2 306 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 SRRTQ9BXP5 876 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 BCO2Q9BYV7 579 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 CRISPLD1Q9H336 500 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 SMYD3Q9H7B4 428 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 CD320Q9NPF0 282 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 ASAH2Q9NR71 780 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 RAB20Q9NX57 234 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 EPS15L1Q9UBC2 864 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 DNMT3BQ9UBC3 853 aaKnown RBP11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 CDH7Q9ULB5 785 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 COQ4Q9Y3A0 265 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 UNC80Q8N2C7 3258 aa11.28□□□□□ -0.6
MTHFD1-214ENST00000556771 DCXO43602 365 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 ACAT1P24752 427 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 LMO2P25791 158 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 ASPAP45381 313 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 FMO5P49326 533 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 DPCR1Q3MIW9 517 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 VSTM1Q6UX27 236 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 PDZD4Q76G19 769 aaPredicted RBP11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 GET4Q7L5D6 327 aaPredicted RBP11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 TRIM59Q8IWR1 403 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 B3GALNT2Q8NCR0 500 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 MYCBPAPQ8TBZ2 947 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 PSMG2Q969U7 264 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 CORO1BQ9BR76 489 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 HCFC1R1Q9NWW0 138 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 GDE1Q9NZC3 331 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 CEP72Q9P209 647 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 IGSF9Q9P2J2 1179 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 MAGEC2Q9UBF1 373 aaPredicted RBP11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 GTF3C4Q9UKN8 822 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 SLC27A5Q9Y2P5 690 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 MRPS23Q9Y3D9 190 aaKnown RBP11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 ATP8B3O60423 1300 aa11.27□□□□□ -0.61
MTHFD1-214ENST00000556771 DOCK8Q8NF50 2099 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 MYBPHLA2RUH7 354 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 PI4K2BG5E9Z4 385 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 PDGFRBP09619 1106 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 CSH1P0DML2 217 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 CSH2P0DML3 217 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 LAMP2P13473 410 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 PTPN1P18031 435 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 SP100P23497 879 aaPredicted RBP11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 PSMC1P62191 440 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 YWHAEP62258 255 aaKnown RBP11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 INCA1Q0VD86 236 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 TAF12Q16514 161 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 PTPN21Q16825 1174 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 CBWD6Q4V339 395 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 CBWD3Q5JTY5 395 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 CBWD5Q5RIA9 395 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 SASS6Q6UVJ0 657 aa11.26□□□□□ -0.61
MTHFD1-214ENST00000556771 SCARA5Q6ZMJ2 495 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms