RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ZBED4O75132 1171 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 CDC45O75419 566 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 VCAM1P19320 739 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 CYP2B6P20813 491 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 APEX1P27695 318 aaKnown RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 HOXA7P31268 230 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 STAT5BP51692 787 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 SNAP25P60880 206 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 CCNA1P78396 465 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 IRF9Q00978 393 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 ALDH6A1Q02252 535 aaKnown RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 PKN2Q16513 984 aaKnown RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 SLC9C1Q4G0N8 1177 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 KIAA1755Q5JYT7 1200 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 CC2D1AQ6P1N0 951 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 RTN4RL1Q86UN2 441 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 IQCA1Q86XH1 822 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 TICAM2Q86XR7 235 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 GPR135Q8IZ08 494 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 ZNF808Q8N4W9 903 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 OR14K1Q8NGZ2 314 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 ESR2Q92731 530 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 FOXRED1Q96CU9 486 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 UBAC1Q9BSL1 405 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 BOCQ9BWV1 1114 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 KRT23Q9C075 422 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 VCPKMTQ9H867 229 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 KAT14Q9H8E8 782 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 FBXO28Q9NVF7 368 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 MTMR4Q9NYA4 1195 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 NYAP2Q9P242 653 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 GABRQQ9UN88 632 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 SLC45A1Q9Y2W3 748 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 RBM8AQ9Y5S9 174 aaKnown RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 PTCH2Q9Y6C5 1203 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 FRMPD2Q68DX3 1309 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 MYPNQ86TC9 1320 aa5.43□□□□□ -1.54
ATXN3-243ENST00000556671 KIAA0100Q14667 2235 aaKnown RBP5.43□□□□□ -1.54
ATXN3-243ENST00000556671 IFIT3O14879 490 aaKnown RBP5.42□□□□□ -1.54
ATXN3-243ENST00000556671 WDR46O15213 610 aaKnown RBP5.42□□□□□ -1.54
ATXN3-243ENST00000556671 SLC26A4O43511 780 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 ORC4O43929 436 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 NDUFB10O96000 172 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 TOP1P11387 765 aaKnown RBP5.42□□□□□ -1.54
ATXN3-243ENST00000556671 ACRV1P26436 265 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 CNGA1P29973 690 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 MSX2P35548 267 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-243ENST00000556671 SLC16A2P36021 539 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 SLC1A4P43007 532 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 MECP2P51608 486 aaKnown RBP5.42□□□□□ -1.54
ATXN3-243ENST00000556671 SOX10P56693 466 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 BMP2KLQ5H9B9 411 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 CCDC174Q6PII3 467 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 FBXO46Q6PJ61 603 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-243ENST00000556671 DPP9Q86TI2 863 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 TBC1D10CQ8IV04 446 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 LILRB2Q8N423 598 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 NCOA7Q8NI08 942 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 IL17DQ8TAD2 202 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 SH3TC2Q8TF17 1288 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 CHURC1Q8WUH1 139 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 PIBF1Q8WXW3 757 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 LPAR1Q92633 364 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 FOXB1Q99853 325 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 IL25Q9H293 177 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 TXNRD2Q9NNW7 524 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 IL17RBQ9NRM6 502 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 ANAPC4Q9UJX5 808 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 ING1Q9UK53 422 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-243ENST00000556671 VWA7Q9Y334 891 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 DOCK5Q9H7D0 1870 aa5.42□□□□□ -1.54
ATXN3-243ENST00000556671 E7EWF7 191 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 PLD2O14939 933 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 CYP21A2P08686 494 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 GOLGA8HP0CJ92 632 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 CTGFP29279 349 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 STAT3P40763 770 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 FNTBP49356 437 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 FLT3LGP49771 235 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 PRKCZQ05513 592 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 GRM7Q14831 915 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 CCDC178Q5BJE1 867 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 IFIT1BQ5T764 474 aaKnown RBP5.41□□□□□ -1.54
ATXN3-243ENST00000556671 IGFL4Q6B9Z1 124 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 CYB5R4Q7L1T6 521 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 C1orf210Q8IVY1 113 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 PRPF38AQ8NAV1 312 aaKnown RBP5.41□□□□□ -1.54
ATXN3-243ENST00000556671 SHCBP1Q8NEM2 672 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 NUP133Q8WUM0 1156 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 STAG1Q8WVM7 1258 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 ERCC4Q92889 916 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-243ENST00000556671 MAP4K1Q92918 833 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 SLF1Q9BQI6 1058 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 TMEM47Q9BQJ4 181 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 UBA5Q9GZZ9 404 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 OSBPL2Q9H1P3 480 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 PORCNQ9H237 461 aa5.41□□□□□ -1.54
ATXN3-243ENST00000556671 AGO3Q9H9G7 860 aaKnown RBP5.41□□□□□ -1.54
ATXN3-243ENST00000556671 RAVER2Q9HCJ3 691 aaKnown RBP5.41□□□□□ -1.54
ATXN3-243ENST00000556671 TLR9Q9NR96 1032 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms