RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 INTS6LQ5JSJ4 861 aaKnown RBP23.2■■□□□ 1.3
SDR39U1-216ENST00000556175 RALGPS2Q86X27 583 aaPredicted RBP23.2■■□□□ 1.3
SDR39U1-216ENST00000556175 CELF5Q8N6W0 485 aaKnown RBP23.2■■□□□ 1.3
SDR39U1-216ENST00000556175 SUMF1Q8NBK3 374 aa23.2■■□□□ 1.3
SDR39U1-216ENST00000556175 CXorf38Q8TB03 319 aa23.2■■□□□ 1.3
SDR39U1-216ENST00000556175 BPIFB1Q8TDL5 484 aa23.2■■□□□ 1.3
SDR39U1-216ENST00000556175 DHX58Q96C10 678 aa23.2■■□□□ 1.3
SDR39U1-216ENST00000556175 TFIP11Q9UBB9 837 aaKnown RBP23.2■■□□□ 1.3
SDR39U1-216ENST00000556175 SNX9Q9Y5X1 595 aa23.2■■□□□ 1.3
SDR39U1-216ENST00000556175 SLC38A8A6NNN8 435 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 PRAMEF12O95522 483 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 TNNC2P02585 160 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 HSP90AA1P07900 732 aaKnown RBP23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 CSH1P0DML2 217 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 CSH2P0DML3 217 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 PCSK1P29120 753 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 AVPR1AP37288 418 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 CDR1P51861 262 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 CNNM4Q6P4Q7 775 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 HSCBQ8IWL3 235 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 ADGRF2Q8IZF7 708 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 SECISBP2LQ93073 1101 aaKnown RBP23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 PI4K2AQ9BTU6 479 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 TMLHEQ9NVH6 421 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 INTS13Q9NVM9 706 aa23.19■■□□□ 1.3
SDR39U1-216ENST00000556175 UBE4BO95155 1302 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 MYBPHLA2RUH7 354 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 SPECC1L-ADORA2AF8WAN1 911 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 LILRB5O75023 590 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 CHRNB1P11230 501 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 DUOXA2Q1HG44 320 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 DGKKQ5KSL6 1271 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 TSSK4Q6SA08 328 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 DPH6Q7L8W6 267 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 GPIHBP1Q8IV16 184 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 CMTM8Q8IZV2 173 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 EPC1Q9H2F5 836 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 KIF9Q9HAQ2 790 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 HSPBP1Q9NZL4 362 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 NCDNQ9UBB6 729 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 UXTQ9UBK9 157 aaPredicted RBP23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 SIX4Q9UIU6 781 aa23.18■■□□□ 1.3
SDR39U1-216ENST00000556175 HMGA1P17096 107 aaKnown RBP23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 CTHP32929 405 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 NLRP12P59046 1061 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 SNRPFP62306 86 aaKnown RBP23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 FAM26FQ5R3K3 315 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 SHC4Q6S5L8 630 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 ERMP1Q7Z2K6 904 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 WDR49Q8IV35 697 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 KIAA2013Q8IYS2 634 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 MRPS31Q92665 395 aaKnown RBP23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 FUBP3Q96I24 572 aaKnown RBP eCLIP23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 LRRC3BQ96PB8 259 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 C7orf25Q9BPX7 421 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 SLC46A2Q9BY10 475 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 FRYLO94915 3013 aa23.17■■□□□ 1.3
SDR39U1-216ENST00000556175 GABRDO14764 452 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 F11P03951 625 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 ACAT1P24752 427 aaKnown RBP23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 CXCL12P48061 93 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 CFAP221Q4G0U5 840 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 EPM2AIP1Q7L775 607 aaPredicted RBP23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 CBWD2Q8IUF1 395 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 SPATA2LQ8IUW3 424 aaPredicted RBP23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 SPEM1Q8N4L4 309 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 GPR161Q8N6U8 529 aaKnown RBP23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 GLIS3Q8NEA6 775 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 ZNF507Q8TCN5 953 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 HPS3Q969F9 1004 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 TRMT2BQ96GJ1 504 aaKnown RBP23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 HPDLQ96IR7 371 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 ZFYVE19Q96K21 471 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 FAM13BQ9NYF5 915 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 GTSE1Q9NYZ3 720 aa23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 MAGED2Q9UNF1 606 aaPredicted RBP23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 SMG5Q9UPR3 1016 aaKnown RBP23.16■■□□□ 1.3
SDR39U1-216ENST00000556175 ZSCAN22P10073 491 aaPredicted RBP23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 TDGF1P13385 188 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 SOX9P48436 509 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 ITPRIPL2Q3MIP1 535 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 LMBRD2Q68DH5 695 aaPredicted RBP23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 ATL3Q6DD88 541 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 C4orf50Q6ZRC1 276 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 UNC13DQ70J99 1090 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 TMEM150AQ86TG1 271 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 FAM84AQ96KN4 292 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 PKMYT1Q99640 499 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 SMG9Q9H0W8 520 aaKnown RBP23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 AGPAT3Q9NRZ7 376 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 GTF3C4Q9UKN8 822 aa23.15■■□□□ 1.3
SDR39U1-216ENST00000556175 NOL4O94818 638 aa23.14■■□□□ 1.29
SDR39U1-216ENST00000556175 F13A1P00488 732 aa23.14■■□□□ 1.29
SDR39U1-216ENST00000556175 CYP2F1P24903 491 aa23.14■■□□□ 1.29
SDR39U1-216ENST00000556175 HOXD13P35453 343 aa23.14■■□□□ 1.29
SDR39U1-216ENST00000556175 GPR15P49685 360 aa23.14■■□□□ 1.29
SDR39U1-216ENST00000556175 MAPRE1Q15691 268 aaKnown RBP23.14■■□□□ 1.29
SDR39U1-216ENST00000556175 SNRNP35Q16560 246 aaKnown RBP23.14■■□□□ 1.29
SDR39U1-216ENST00000556175 DDR2Q16832 855 aa23.14■■□□□ 1.29
SDR39U1-216ENST00000556175 SOWAHAQ2M3V2 549 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms