RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ODF2Q5BJF6 829 aa25.64■■□□□ 1.69
TMEM260-207ENST00000555497 IQSEC1Q6DN90 963 aa25.64■■□□□ 1.69
TMEM260-207ENST00000555497 XYLT1Q86Y38 959 aa25.64■■□□□ 1.69
TMEM260-207ENST00000555497 PWWP2AQ96N64 755 aa25.64■■□□□ 1.69
TMEM260-207ENST00000555497 PARK7Q99497 189 aaKnown RBP25.64■■□□□ 1.69
TMEM260-207ENST00000555497 ADAMTS10Q9H324 1103 aa25.64■■□□□ 1.69
TMEM260-207ENST00000555497 LCMT1Q9UIC8 334 aa25.64■■□□□ 1.69
TMEM260-207ENST00000555497 STRIP2Q9ULQ0 834 aa25.64■■□□□ 1.69
TMEM260-207ENST00000555497 TLDC2A0PJX2 215 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 KRT3P12035 628 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 ADCY8P40145 1251 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 PTGISQ16647 500 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 ARFGAP2Q8N6H7 521 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 CDC42EP4Q9H3Q1 356 aaKnown RBP25.63■■□□□ 1.69
TMEM260-207ENST00000555497 CYP3A43Q9HB55 503 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 SMIM23A6NLE4 172 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 ATF2P15336 505 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 HOXA11P31270 313 aaPredicted RBP25.63■■□□□ 1.69
TMEM260-207ENST00000555497 KYAT1Q16773 422 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 HOOK3Q86VS8 718 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 EMC1Q8N766 993 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 FAM49AQ9H0Q0 323 aaPredicted RBP25.63■■□□□ 1.69
TMEM260-207ENST00000555497 DNAJC17Q9NVM6 304 aaKnown RBP25.63■■□□□ 1.69
TMEM260-207ENST00000555497 DNPEPQ9ULA0 475 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 WDR3Q9UNX4 943 aaKnown RBP eCLIP25.63■■□□□ 1.69
TMEM260-207ENST00000555497 GINS2Q9Y248 185 aa25.63■■□□□ 1.69
TMEM260-207ENST00000555497 SCN1AP35498 2009 aa25.62■■□□□ 1.69
TMEM260-207ENST00000555497 LIASO43766 372 aa25.62■■□□□ 1.69
TMEM260-207ENST00000555497 CYP3A5P20815 502 aa25.62■■□□□ 1.69
TMEM260-207ENST00000555497 PSMA2P25787 234 aa25.62■■□□□ 1.69
TMEM260-207ENST00000555497 KLRC2P26717 231 aa25.62■■□□□ 1.69
TMEM260-207ENST00000555497 SEC24CP53992 1094 aa25.62■■□□□ 1.69
TMEM260-207ENST00000555497 ZNF410Q86VK4 478 aa25.62■■□□□ 1.69
TMEM260-207ENST00000555497 GLIS1Q8NBF1 620 aa25.62■■□□□ 1.69
TMEM260-207ENST00000555497 EPS8L3Q8TE67 593 aaKnown RBP25.62■■□□□ 1.69
TMEM260-207ENST00000555497 KIF12Q96FN5 646 aa25.62■■□□□ 1.69
TMEM260-207ENST00000555497 C2CD2Q9Y426 696 aa25.62■■□□□ 1.69
TMEM260-207ENST00000555497 hCG_1818297A0A087WSY0 165 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 DYNC1LI2O43237 492 aaPredicted RBP25.61■■□□□ 1.69
TMEM260-207ENST00000555497 CELF2O95319 508 aaKnown RBP25.61■■□□□ 1.69
TMEM260-207ENST00000555497 IL1R2P27930 398 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 FKBP1BP68106 108 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 HEXIM2Q96MH2 286 aaKnown RBP25.61■■□□□ 1.69
TMEM260-207ENST00000555497 EPN3Q9H201 632 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 METTL5Q9NRN9 209 aaKnown RBP25.61■■□□□ 1.69
TMEM260-207ENST00000555497 ANAPC5Q9UJX4 755 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 ITGA11Q9UKX5 1188 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 C3orf70A6NLC5 250 aaPredicted RBP25.61■■□□□ 1.69
TMEM260-207ENST00000555497 NPTXRO95502 500 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 GRM5P41594 1212 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 CDKN2BP42772 138 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 GPD2P43304 727 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 NDST1P52848 882 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 SLC25A11Q02978 314 aaKnown RBP25.61■■□□□ 1.69
TMEM260-207ENST00000555497 UBA3Q8TBC4 463 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 PGM2Q96G03 612 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 ADPGKQ9BRR6 497 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 CPA4Q9UI42 421 aa25.61■■□□□ 1.69
TMEM260-207ENST00000555497 LRRD1A4D1F6 860 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 M0QYV0 167 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 LRCH4O75427 683 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 CETN2P41208 172 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 IFI35P80217 286 aaPredicted RBP25.6■■□□□ 1.69
TMEM260-207ENST00000555497 RBP5P82980 135 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 ZNF365Q70YC5 407 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 LENG1Q96BZ8 264 aaPredicted RBP25.6■■□□□ 1.69
TMEM260-207ENST00000555497 TMEM109Q9BVC6 243 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 SLC15A5A6NIM6 579 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 GPR32O75388 356 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 TJP3O95049 919 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 HIC1Q14526 733 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 CNGA2Q16280 664 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 TRMT10CQ7L0Y3 403 aaKnown RBP25.6■■□□□ 1.69
TMEM260-207ENST00000555497 DPH6Q7L8W6 267 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 ZMAT2Q96NC0 199 aaKnown RBP25.6■■□□□ 1.69
TMEM260-207ENST00000555497 TRAIPQ9BWF2 469 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 ZWILCHQ9H900 591 aa25.6■■□□□ 1.69
TMEM260-207ENST00000555497 BARX2Q9UMQ3 279 aaPredicted RBP25.6■■□□□ 1.69
TMEM260-207ENST00000555497 PPEF2O14830 753 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 PSMC4P43686 418 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 SLCO1A2P46721 670 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 GSCP56915 257 aaPredicted RBP25.59■■□□□ 1.69
TMEM260-207ENST00000555497 COPS2P61201 443 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 INCA1Q0VD86 236 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 BYSLQ13895 437 aaKnown RBP25.59■■□□□ 1.69
TMEM260-207ENST00000555497 SMTNL2Q2TAL5 461 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 TFDP3Q5H9I0 405 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 C2orf69Q8N8R5 385 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 KAT2BQ92831 832 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 HAUS1Q96CS2 278 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 EIF2AQ9BY44 585 aaKnown RBP25.59■■□□□ 1.69
TMEM260-207ENST00000555497 SYNCQ9H7C4 482 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 DDX56Q9NY93 547 aaKnown RBP25.59■■□□□ 1.69
TMEM260-207ENST00000555497 SNTG2Q9NY99 539 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 FLRT1Q9NZU1 646 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 ACSL3O95573 720 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 SMIM10L2AP0DMW4 78 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 SMIM10L2BP0DMW5 78 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 VDRP11473 427 aa25.59■■□□□ 1.69
TMEM260-207ENST00000555497 P4HA1P13674 534 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms