RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SCARB1Q8WTV0 552 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 MRGPRX1Q96LB2 322 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 CERS4Q9HA82 394 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 SLC23A1Q9UHI7 598 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 TLK1Q9UKI8 766 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 ZDHHC8Q9ULC8 765 aa6.51□□□□□ -1.37
VRK1-205ENST00000555402 POLR2AP24928 1970 aaKnown RBP6.5□□□□□ -1.37
VRK1-205ENST00000555402 B5MCH6 92 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 TBC1D4O60343 1298 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 MATN4O95460 622 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 IGLV2-14P01704 120 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 PARP1P09874 1014 aaKnown RBP6.5□□□□□ -1.37
VRK1-205ENST00000555402 EN2P19622 333 aaPredicted RBP6.5□□□□□ -1.37
VRK1-205ENST00000555402 MPLP40238 635 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 CLRN1P58418 232 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 NHLH2Q02577 135 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 ZNF543Q08ER8 600 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 TP53BP2Q13625 1128 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 FAM83BQ5T0W9 1011 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 ZNF783Q6ZMS7 281 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 GPRIN1Q7Z2K8 1008 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 SESTD1Q86VW0 696 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 SLC9A6Q92581 669 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 SELENOOQ9BVL4 669 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 UNKQ9C0B0 810 aaKnown RBP6.5□□□□□ -1.37
VRK1-205ENST00000555402 STARD7Q9NQZ5 370 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 CFAP97Q9P2B7 532 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 CLCA2Q9UQC9 943 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 LRCH1Q9Y2L9 728 aa6.5□□□□□ -1.37
VRK1-205ENST00000555402 PRR5-ARHGAP8B1AHC4 643 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 PJA2O43164 708 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 NCK2O43639 380 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 CREB3O43889 395 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 TCEA3O75764 348 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 IL18RAPO95256 599 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 POMCP01189 267 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 GNAI2P04899 355 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 GJB1P08034 283 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 ALAS1P13196 640 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 CTGFP29279 349 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 PSMC1P62191 440 aaKnown RBP6.49□□□□□ -1.37
VRK1-205ENST00000555402 NHLH1Q02575 133 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 DAG1Q14118 895 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 HABP2Q14520 560 aaPredicted RBP6.49□□□□□ -1.37
VRK1-205ENST00000555402 C3orf38Q5JPI3 329 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 ANKS6Q68DC2 871 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 SYT12Q8IV01 421 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 KBTBD7Q8WVZ9 684 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 ASB10Q8WXI3 467 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 SMG7Q92540 1137 aaKnown RBP6.49□□□□□ -1.37
VRK1-205ENST00000555402 ADAM2Q99965 735 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 SPON1Q9HCB6 807 aa6.49□□□□□ -1.37
VRK1-205ENST00000555402 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.49□□□□□ -1.37
VRK1-205ENST00000555402 AFF4Q9UHB7 1163 aaKnown RBP6.49□□□□□ -1.37
VRK1-205ENST00000555402 SETD1BQ9UPS6 1966 aaKnown RBP6.48□□□□□ -1.37
VRK1-205ENST00000555402 TBKBP1A7MCY6 615 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 BTN3A1O00481 513 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 SLC43A1O75387 559 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 RBMXL2O75526 392 aaKnown RBP6.48□□□□□ -1.37
VRK1-205ENST00000555402 EGR2P11161 476 aaPredicted RBP6.48□□□□□ -1.37
VRK1-205ENST00000555402 ABCB4P21439 1286 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 DDX6P26196 483 aaKnown RBP eCLIP6.48□□□□□ -1.37
VRK1-205ENST00000555402 MPP3Q13368 585 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 EMC10Q5UCC4 262 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 IZUMO3Q5VZ72 239 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 ANO1Q5XXA6 986 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 POF1BQ8WVV4 589 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 TFAP2CQ92754 450 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 KIAA1191Q96A73 305 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 TRIM54Q9BYV2 358 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 GSTO2Q9H4Y5 243 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 TRMT13Q9NUP7 481 aaKnown RBP6.48□□□□□ -1.37
VRK1-205ENST00000555402 STK32BQ9NY57 414 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 JKAMPQ9P055 326 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 PADI4Q9UM07 663 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 CEP83Q9Y592 693 aa6.48□□□□□ -1.37
VRK1-205ENST00000555402 DNAJC9-AS1A6NH13 148 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 F8W8V4 182 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 HAUS5O94927 633 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 RARBP10826 455 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 MAPK10P53779 464 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 SLC13A2Q13183 592 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 TRIM14Q14142 442 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 KIF22Q14807 665 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 UBXN2BQ14CS0 331 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 PDCD4Q53EL6 469 aaKnown RBP6.47□□□□□ -1.37
VRK1-205ENST00000555402 SLC44A4Q53GD3 710 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 ATXN7L2Q5T6C5 722 aaPredicted RBP6.47□□□□□ -1.37
VRK1-205ENST00000555402 UTP14CQ5TAP6 766 aaKnown RBP6.47□□□□□ -1.37
VRK1-205ENST00000555402 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.47□□□□□ -1.37
VRK1-205ENST00000555402 MPP5Q8N3R9 675 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 ZFP28Q8NHY6 868 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 ZNF384Q8TF68 577 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 DUSP26Q9BV47 211 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 MED16Q9Y2X0 877 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 PNPLA7Q6ZV29 1317 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 SALL3Q9BXA9 1300 aa6.47□□□□□ -1.37
VRK1-205ENST00000555402 ZNF785A8K8V0 405 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 MYO1CO00159 1063 aa6.46□□□□□ -1.38
VRK1-205ENST00000555402 APOL1O14791 398 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms