RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 FGAP02671 866 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 ELFN1P0C7U0 828 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 SRSF4Q08170 494 aaKnown RBP6.51□□□□□ -1.37
VRK1-203ENST00000555067 UAP1L1Q3KQV9 507 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 EFCAB2Q5VUJ9 269 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 PNMA8AQ86V59 439 aaPredicted RBP6.51□□□□□ -1.37
VRK1-203ENST00000555067 JPH3Q8WXH2 748 aaPredicted RBP6.51□□□□□ -1.37
VRK1-203ENST00000555067 OSBPL9Q96SU4 736 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 VRK1Q99986 396 aaPredicted RBP6.51□□□□□ -1.37
VRK1-203ENST00000555067 RHOBTB2Q9BYZ6 727 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 BRD9Q9H8M2 597 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 CFAP97Q9P2B7 532 aa6.51□□□□□ -1.37
VRK1-203ENST00000555067 LAS1LQ9Y4W2 734 aaKnown RBP6.51□□□□□ -1.37
VRK1-203ENST00000555067 ADGRA2Q96PE1 1338 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 WIPF3A6NGB9 483 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 NT5C1B-RDH14C9J2C7 533 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 RFPL1O75677 317 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 ABLIM3O94929 683 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 TTLL1O95922 423 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 FTH1P19P0C7X4 201 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 ITPKBP27987 946 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 FXR1P51114 621 aaKnown RBP eCLIP6.5□□□□□ -1.37
VRK1-203ENST00000555067 PCBP2Q15366 365 aaKnown RBP eCLIP6.5□□□□□ -1.372e-6■■■■□ 25.4
VRK1-203ENST00000555067 KHDC1Q4VXA5 237 aaKnown RBP6.5□□□□□ -1.37
VRK1-203ENST00000555067 FCRLBQ6BAA4 426 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 HAPLN3Q96S86 360 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 CNPPD1Q9BV87 410 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 SLC13A1Q9BZW2 595 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 SIK2Q9H0K1 926 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 OBP2AQ9NY56 170 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 TAGLN3Q9UI15 199 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 SERPINB13Q9UIV8 391 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 NR2E3Q9Y5X4 410 aa6.5□□□□□ -1.37
VRK1-203ENST00000555067 ZNF785A8K8V0 405 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 VSTM5A8MXK1 200 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 F5H697 171 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 IKBKBO14920 756 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 ARIH2O95376 493 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 PRKCGP05129 697 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 NDUFV1P49821 464 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 HNRNPMP52272 730 aaKnown RBP eCLIP6.49□□□□□ -1.37
VRK1-203ENST00000555067 SNAPC2Q13487 334 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 MORC3Q14149 939 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 IL31Q6EBC2 164 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 ZNF425Q6IV72 752 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 AMIGO2Q86SJ2 522 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 BRIP1Q9BX63 1249 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 PPCSQ9HAB8 311 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 GPR35Q9HC97 309 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 ETAA1Q9NY74 926 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 ZNF70Q9UC06 446 aaPredicted RBP6.49□□□□□ -1.37
VRK1-203ENST00000555067 POLHQ9Y253 713 aa6.49□□□□□ -1.37
VRK1-203ENST00000555067 MANSC4A6NHS7 340 aaPredicted RBP6.48□□□□□ -1.37
VRK1-203ENST00000555067 VWC2LB2RUY7 222 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 GJB1P08034 283 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 LPOP22079 712 aaPredicted RBP6.48□□□□□ -1.37
VRK1-203ENST00000555067 SMARCA1P28370 1054 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 PSMC1P62191 440 aaKnown RBP6.48□□□□□ -1.37
VRK1-203ENST00000555067 DSC2Q02487 901 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 SPICE1Q8N0Z3 855 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 FBXO41Q8TF61 875 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 PPM1EQ8WY54 764 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 TIFAQ96CG3 184 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 TPSD1Q9BZJ3 242 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 PTPRHQ9HD43 1115 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 EHD3Q9NZN3 535 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 IP6K2Q9UHH9 426 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 SPEF1Q9Y4P9 236 aa6.48□□□□□ -1.37
VRK1-203ENST00000555067 IFIT2P09913 472 aaKnown RBP6.47□□□□□ -1.37
VRK1-203ENST00000555067 TRIM27P14373 513 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 ITGALP20701 1170 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 PIK3CGP48736 1102 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 NEK3P51956 506 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 ZNF135P52742 658 aaPredicted RBP6.47□□□□□ -1.37
VRK1-203ENST00000555067 HABP2Q14520 560 aaPredicted RBP6.47□□□□□ -1.37
VRK1-203ENST00000555067 INO80DQ53TQ3 878 aaPredicted RBP6.47□□□□□ -1.37
VRK1-203ENST00000555067 PLAC9Q5JTB6 97 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 THEMIS2Q5TEJ8 643 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 SLC30A10Q6XR72 485 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 TPH2Q8IWU9 490 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 MIER2Q8N344 545 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 C3orf20Q8ND61 904 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 NAP1L4Q99733 375 aaKnown RBP6.47□□□□□ -1.37
VRK1-203ENST00000555067 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.47□□□□□ -1.37
VRK1-203ENST00000555067 ADAM21Q9UKJ8 722 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 ST3GAL5Q9UNP4 418 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 DAAM1Q9Y4D1 1078 aa6.47□□□□□ -1.37
VRK1-203ENST00000555067 SLC16A6O15403 523 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 DTNBO60941 627 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 RHOP08100 348 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 RARBP10826 455 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 TCF15Q12870 199 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 SLC10A2Q12908 348 aaPredicted RBP6.46□□□□□ -1.38
VRK1-203ENST00000555067 KIF22Q14807 665 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 PTPN21Q16825 1174 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 GRAMD1BQ3KR37 738 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 TEDDM1Q5T9Z0 273 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 SUMO4Q6EEV6 95 aa6.46□□□□□ -1.38
VRK1-203ENST00000555067 CXorf57Q6NSI4 855 aaKnown RBP6.46□□□□□ -1.38
VRK1-203ENST00000555067 RASAL3Q86YV0 1011 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms