RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ASB7Q9H672 318 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 KIAA1586Q9HCI6 787 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 KANSL3Q9P2N6 904 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 TUBGCP4Q9UGJ1 667 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 MSRAQ9UJ68 235 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 STXBP5LQ9Y2K9 1186 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 ZC3H11AO75152 810 aaKnown RBP eCLIP18.49■□□□□ 0.55
SHOX-204ENST00000554971 MYL7Q01449 175 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 RNASELQ05823 741 aaKnown RBP18.49■□□□□ 0.55
SHOX-204ENST00000554971 CUL1Q13616 776 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 DRAP1Q14919 205 aaPredicted RBP18.49■□□□□ 0.55
SHOX-204ENST00000554971 TCEAL1Q15170 157 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 LMBRD2Q68DH5 695 aaPredicted RBP18.49■□□□□ 0.55
SHOX-204ENST00000554971 POP1Q99575 1024 aaKnown RBP18.49■□□□□ 0.55
SHOX-204ENST00000554971 MTUS1Q9ULD2 1270 aa18.49■□□□□ 0.55
SHOX-204ENST00000554971 VWA8A3KMH1 1905 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 PGRMC1O00264 195 aaKnown RBP18.48■□□□□ 0.55
SHOX-204ENST00000554971 KCNK3O14649 394 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 HEXIM1O94992 359 aaKnown RBP18.48■□□□□ 0.55
SHOX-204ENST00000554971 GUCY2FP51841 1108 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 SLC7A5Q01650 507 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 PPP2R2DQ66LE6 453 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 PEX26Q7Z412 305 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 FAM76AQ8TAV0 307 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 RFFLQ8WZ73 363 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 KIF12Q96FN5 646 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 RUFY1Q96T51 708 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 BRWD1Q9NSI6 2320 aa18.48■□□□□ 0.55
SHOX-204ENST00000554971 COL4A4P53420 1690 aaPredicted RBP18.47■□□□□ 0.55
SHOX-204ENST00000554971 CASTOR2A6NHX0 329 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 NT5C1B-RDH14C9J2C7 533 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 PHACTR2O75167 634 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 HADHBP55084 474 aaKnown RBP18.47■□□□□ 0.55
SHOX-204ENST00000554971 DLG4P78352 724 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 C1orf220Q5T0J3 134 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 PARD3BQ8TEW8 1205 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 BCL7CQ8WUZ0 217 aaPredicted RBP18.47■□□□□ 0.55
SHOX-204ENST00000554971 TTYH1Q9H313 450 aaPredicted RBP18.47■□□□□ 0.55
SHOX-204ENST00000554971 CERS4Q9HA82 394 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 C2CD2Q9Y426 696 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 VCANP13611 3396 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 GOLGA6CA6NDK9 693 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 EPOPA6NHQ4 379 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 IL18RAPO95256 599 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 GALTP07902 379 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 GLI1P08151 1106 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 GOLGA6DP0CG33 693 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 SLC11A1P49279 550 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 GALCP54803 685 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 BCAR1P56945 870 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 ENPEPQ07075 957 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 TUSC3Q13454 348 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 PSMD6Q15008 389 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 CD302Q8IX05 232 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 OR5B17Q8NGF7 314 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 CTNNBL1Q8WYA6 563 aaPredicted RBP18.47■□□□□ 0.55
SHOX-204ENST00000554971 CCDC127Q96BQ5 260 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 HES6Q96HZ4 224 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 KRT12Q99456 494 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 SLITRK6Q9H5Y7 841 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 SLC28A3Q9HAS3 691 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 EPB41L5Q9HCM4 733 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 GOLGA6AQ9NYA3 693 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 SMARCAL1Q9NZC9 954 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 EHD2Q9NZN4 543 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 AJAP1Q9UKB5 411 aaPredicted RBP18.47■□□□□ 0.55
SHOX-204ENST00000554971 AMFRQ9UKV5 643 aa18.47■□□□□ 0.55
SHOX-204ENST00000554971 ITGB1P05556 798 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 DLATP10515 647 aaKnown RBP18.46■□□□□ 0.55
SHOX-204ENST00000554971 TNFAIP3P21580 790 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 ERVK-21P61565 698 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 GUCY2DQ02846 1103 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 TMEM132DQ14C87 1099 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 CBWD6Q4V339 395 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 EPC2Q52LR7 807 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 CBWD3Q5JTY5 395 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 CBWD5Q5RIA9 395 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 KCNT2Q6UVM3 1135 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 NT5DC3Q86UY8 548 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 GSPT2Q8IYD1 628 aaKnown RBP18.46■□□□□ 0.55
SHOX-204ENST00000554971 COLGALT1Q8NBJ5 622 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 C3orf58Q8NDZ4 430 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 LMO3Q8TAP4 145 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 CXorf38Q8TB03 319 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 ZNF516Q92618 1163 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 NAP1L3Q99457 506 aaPredicted RBP18.46■□□□□ 0.55
SHOX-204ENST00000554971 ISCUQ9H1K1 167 aa18.46■□□□□ 0.55
SHOX-204ENST00000554971 ANKRD62A6NC57 917 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 BHMG1C9JSJ3 638 aaPredicted RBP18.45■□□□□ 0.54
SHOX-204ENST00000554971 NRP1O14786 923 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 SHOX2O60902 331 aaPredicted RBP18.45■□□□□ 0.54
SHOX-204ENST00000554971 BMPR1AP36894 532 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 CLCNKBP51801 687 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 VAMP7P51809 220 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 CLDN10P78369 228 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 UPP1Q16831 310 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 RHOT2Q8IXI1 618 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 IQCKQ8N0W5 287 aa18.45■□□□□ 0.54
SHOX-204ENST00000554971 LNX1Q8TBB1 728 aaPredicted RBP18.45■□□□□ 0.54
SHOX-204ENST00000554971 TGS1Q96RS0 853 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms