RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 EFCAB12Q6NXP0 572 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 DRICH1Q6PGQ1 229 aaPredicted RBP5.93□□□□□ -1.46
SCFD1-209ENST00000553280 ZDHHC24Q6UX98 284 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 KIAA0408Q6ZU52 694 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 LIMS2Q7Z4I7 341 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 GAS2L3Q86XJ1 694 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 KRT73Q86Y46 540 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 IPO4Q8TEX9 1081 aaKnown RBP5.93□□□□□ -1.46
SCFD1-209ENST00000553280 MOGAT1Q96PD6 335 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 GPR20Q99678 358 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 VKORC1Q9BQB6 163 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 CNPPD1Q9BV87 410 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 CPEB1Q9BZB8 566 aaKnown RBP5.93□□□□□ -1.46
SCFD1-209ENST00000553280 IMPG2Q9BZV3 1241 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCFD1-209ENST00000553280 C12orf65Q9H3J6 166 aaKnown RBP5.93□□□□□ -1.46
SCFD1-209ENST00000553280 AS3MTQ9HBK9 375 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 SMPD4Q9NXE4 827 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 RRN3Q9NYV6 651 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 PDP2Q9P2J9 529 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 CLCA2Q9UQC9 943 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 HDAC5Q9UQL6 1122 aa5.93□□□□□ -1.46
SCFD1-209ENST00000553280 PRR5-ARHGAP8B1AHC4 643 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 IPO5O00410 1097 aaKnown RBP5.92□□□□□ -1.46
SCFD1-209ENST00000553280 TRIM38O00635 465 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 PIP5K1BO14986 540 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 NCAM2O15394 837 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 IRAK2O43187 625 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 CCP110O43303 1012 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 KIF20AO95235 890 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 PYGLP06737 847 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 CR2P20023 1033 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 SLC6A2P23975 617 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 ACVR2AP27037 513 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 MAGEA10P43363 369 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-209ENST00000553280 TBX2Q13207 712 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-209ENST00000553280 MAPKAPK3Q16644 382 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 PLAG1Q6DJT9 500 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 MFSD5Q6N075 450 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 USP49Q70CQ1 688 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 SUGP1Q8IWZ8 645 aaKnown RBP5.92□□□□□ -1.46
SCFD1-209ENST00000553280 FAM46DQ8NEK8 389 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 STT3BQ8TCJ2 826 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 STYXQ8WUJ0 223 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 RAPGEF4Q8WZA2 1011 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 NEIL1Q96FI4 390 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-209ENST00000553280 MPP4Q96JB8 637 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 ZSCAN31Q96LW9 406 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-209ENST00000553280 MESP1Q9BRJ9 268 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 SEC61A2Q9H9S3 476 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 HEYLQ9NQ87 328 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-209ENST00000553280 ZSCAN32Q9NX65 697 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 HESX1Q9UBX0 185 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 CNOT11Q9UKZ1 510 aaKnown RBP5.92□□□□□ -1.46
SCFD1-209ENST00000553280 OAZ3Q9UMX2 235 aa5.92□□□□□ -1.46
SCFD1-209ENST00000553280 DRGXA6NNA5 263 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 RAB27BO00194 218 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 CKBP12277 381 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 CPT1AP50416 773 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 POLE2P56282 527 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 ARHGEF7Q14155 803 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 TAF5Q15542 800 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 INSCQ1MX18 579 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 SLC4A8Q2Y0W8 1093 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 PLA1AQ53H76 456 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 METTL24Q5JXM2 366 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 FCRL6Q6DN72 434 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 MZT2AQ6P582 158 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 GLB1LQ6UWU2 654 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 PDPRQ8NCN5 879 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 OTUD7AQ8TE49 926 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-209ENST00000553280 NUP133Q8WUM0 1156 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 USP13Q92995 863 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-209ENST00000553280 PPM1MQ96MI6 270 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 C8orf49Q96NF6 230 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 PPP1R9BQ96SB3 815 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 NELL2Q99435 816 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 DPYSL5Q9BPU6 564 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 CPPED1Q9BRF8 314 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-209ENST00000553280 FAM167BQ9BTA0 163 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 HECAQ9UBI9 543 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-209ENST00000553280 DKK4Q9UBT3 224 aa5.91□□□□□ -1.46
SCFD1-209ENST00000553280 ZMYND8Q9ULU4 1186 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-209ENST00000553280 EIF3FO00303 357 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-209ENST00000553280 LAMTOR5O43504 91 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 CDC14BO60729 498 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 PRSS23O95084 383 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 EGR1P18146 543 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 MGAT1P26572 445 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 ADAM17P78536 824 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 LMOD3Q0VAK6 560 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 SIM2Q14190 667 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-209ENST00000553280 PUM1Q14671 1186 aaKnown RBP eCLIP5.9□□□□□ -1.46
SCFD1-209ENST00000553280 IQCB1Q15051 598 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 ZXDCQ2QGD7 858 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-209ENST00000553280 ARHGAP15Q53QZ3 475 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 CRTC1Q6UUV9 634 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 MED25Q71SY5 747 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 ZFPM1Q8IX07 1006 aa5.9□□□□□ -1.46
SCFD1-209ENST00000553280 CFAP52Q8N1V2 620 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms