RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 CST3P01034 146 aaPredicted RBP17.05■□□□□ 0.32
CDK4-215ENST00000553237 CYP2F1P24903 491 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 TARSP26639 723 aaKnown RBP17.05■□□□□ 0.32
CDK4-215ENST00000553237 LHX1P48742 406 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 SNRPFP62306 86 aaKnown RBP17.05■□□□□ 0.32
CDK4-215ENST00000553237 STK4Q13043 487 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 PSMD6Q15008 389 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 KMT5BQ4FZB7 885 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 ASCL5Q7RTU5 278 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 C1orf210Q8IVY1 113 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 YAF2Q8IY57 180 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 E2F7Q96AV8 911 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 LRRC3BQ96PB8 259 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 CGRRF1Q99675 332 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 BCO2Q9BYV7 579 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 EXOC1Q9NV70 894 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 MAGED2Q9UNF1 606 aaPredicted RBP17.05■□□□□ 0.32
CDK4-215ENST00000553237 ATP6V1DQ9Y5K8 247 aa17.05■□□□□ 0.32
CDK4-215ENST00000553237 MYBPHLA2RUH7 354 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 SHISA7A6NL88 538 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 DPYSL4O14531 572 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 GABRDO14764 452 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 EXOC3O60645 756 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 ATP2C2O75185 946 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 LMO2P25791 158 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 PCSK1P29120 753 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 CDC25CP30307 473 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 DDR2Q16832 855 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 KIAA0895Q8NCT3 520 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 ZNF516Q92618 1163 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 GCNAQ96QF7 691 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 MMS19Q96T76 1030 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 NELL2Q99435 816 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 PKMYT1Q99640 499 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 OSBPL6Q9BZF3 934 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 SMG9Q9H0W8 520 aaKnown RBP17.04■□□□□ 0.32
CDK4-215ENST00000553237 TASP1Q9H6P5 420 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 SPATA6Q9NWH7 488 aaPredicted RBP17.04■□□□□ 0.32
CDK4-215ENST00000553237 USP25Q9UHP3 1055 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 NDRG2Q9UN36 371 aaKnown RBP17.04■□□□□ 0.32
CDK4-215ENST00000553237 HPSEQ9Y251 543 aa17.04■□□□□ 0.32
CDK4-215ENST00000553237 PDGFRBP09619 1106 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 HMGA1P17096 107 aaKnown RBP17.03■□□□□ 0.32
CDK4-215ENST00000553237 SYKP43405 635 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 CASP4P49662 377 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 NDUFA8P51970 172 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 PSMC1P62191 440 aaKnown RBP17.03■□□□□ 0.32
CDK4-215ENST00000553237 DPH6Q7L8W6 267 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 SPATA2LQ8IUW3 424 aaPredicted RBP17.03■□□□□ 0.32
CDK4-215ENST00000553237 C12orf56Q8IXR9 622 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 SPATA18Q8TC71 538 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 KBTBD7Q8WVZ9 684 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 ZFYVE19Q96K21 471 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 SLC46A2Q9BY10 475 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 GZF1Q9H116 711 aaPredicted RBP17.03■□□□□ 0.32
CDK4-215ENST00000553237 CGNQ9P2M7 1197 aaKnown RBP17.03■□□□□ 0.32
CDK4-215ENST00000553237 MRPS17Q9Y2R5 130 aaKnown RBP17.03■□□□□ 0.32
CDK4-215ENST00000553237 PIAS3Q9Y6X2 628 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 R4GN57 208 aa17.03■□□□□ 0.32
CDK4-215ENST00000553237 PRR23AA6NEV1 266 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 PRAMEF12O95522 483 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 F11P03951 625 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 PRR29P0C7W0 189 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 SP9P0CG40 484 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 CSH1P0DML2 217 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 CSH2P0DML3 217 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 NLRP12P59046 1061 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 RPL10AP62906 217 aaKnown RBP17.02■□□□□ 0.32
CDK4-215ENST00000553237 PSMD2Q13200 908 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 TRPC3Q13507 836 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 LIMS2Q7Z4I7 341 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 TMEM150AQ86TG1 271 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 SCN4BQ8IWT1 228 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 MAML2Q8IZL2 1156 aaPredicted RBP17.02■□□□□ 0.32
CDK4-215ENST00000553237 TTC8Q8TAM2 541 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 PLEKHO2Q8TD55 490 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 CSGALNACT1Q8TDX6 532 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 FAM3CQ92520 227 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 NKD2Q969F2 451 aaPredicted RBP17.02■□□□□ 0.32
CDK4-215ENST00000553237 SYT15Q9BQS2 421 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 MRPL45Q9BRJ2 306 aaKnown RBP17.02■□□□□ 0.32
CDK4-215ENST00000553237 GDPD2Q9HCC8 539 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 ABCB6Q9NP58 842 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 TRPV5Q9NQA5 729 aa17.02■□□□□ 0.32
CDK4-215ENST00000553237 SLC38A8A6NNN8 435 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 ARNTLO00327 626 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 MAN2B1O00754 1011 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 CHADO15335 359 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 NCAM2O15394 837 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 LAMTOR5O43504 91 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 PHACTR2O75167 634 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 RPN1P04843 607 aaKnown RBP17.01■□□□□ 0.31
CDK4-215ENST00000553237 WARSP23381 471 aaKnown RBP17.01■□□□□ 0.31
CDK4-215ENST00000553237 CCNE1P24864 410 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 MYL6P60660 151 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 FCHO2Q0JRZ9 810 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 FZD5Q13467 585 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 WDR72Q3MJ13 1102 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 TXNDC8Q6A555 127 aa17.01■□□□□ 0.31
CDK4-215ENST00000553237 FAM171BQ6P995 826 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms