RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 EXOC1Q9NV70 894 aa20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 MRPS17Q9Y2R5 130 aaKnown RBP20.01■□□□□ 0.79
CHMP1A-207ENST00000549328 FAM170BA6NMN3 283 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 ZNF263O14978 683 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 NCAM2O15394 837 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 FAM163BP0C2L3 166 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 GLULP15104 373 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 SYKP43405 635 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 CDR1P51861 262 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 RPL10AP62906 217 aaKnown RBP20■□□□□ 0.79
CHMP1A-207ENST00000549328 FCHO2Q0JRZ9 810 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 UBXN2BQ14CS0 331 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 CFAP221Q4G0U5 840 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 STXBP5Q5T5C0 1151 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 GPR158Q5T848 1215 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 OSTM1Q86WC4 334 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 C1orf210Q8IVY1 113 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 GIPC2Q8TF65 315 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 CCDC127Q96BQ5 260 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 FUBP3Q96I24 572 aaKnown RBP eCLIP20■□□□□ 0.79
CHMP1A-207ENST00000549328 GCNAQ96QF7 691 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 PI4K2AQ9BTU6 479 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 BCO2Q9BYV7 579 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 TASP1Q9H6P5 420 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 OBP2AQ9NY56 170 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 GTF3C4Q9UKN8 822 aa20■□□□□ 0.79
CHMP1A-207ENST00000549328 ZFHX2Q9C0A1 2572 aaPredicted RBP19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 SOBPA7XYQ1 873 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 MAN2B1O00754 1011 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 EXOC3O60645 756 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 CST3P01034 146 aaPredicted RBP19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 CSH1P0DML2 217 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 CSH2P0DML3 217 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 HMGA1P17096 107 aaKnown RBP19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 CD72P21854 359 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 ACAT1P24752 427 aaKnown RBP19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 MLLT6P55198 1093 aaPredicted RBP19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 KMT5BQ4FZB7 885 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 FAM171BQ6P995 826 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 SLC9A9Q8IVB4 645 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 KIAA0895Q8NCT3 520 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 CLDN23Q96B33 292 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 CHAMP1Q96JM3 812 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 DMAC2Q9NW81 257 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 MTF2Q9Y483 593 aaPredicted RBP19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 F5P12259 2224 aa19.99■□□□□ 0.79
CHMP1A-207ENST00000549328 A0A1W2PQ27 194 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 A0A1W2PQ64 194 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 A0A1W2PQD8 194 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 SHISA7A6NL88 538 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 CHADO15335 359 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 GFRA3O60609 400 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 LRRN2O75325 713 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 WARSP23381 471 aaKnown RBP19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 RPS9P46781 194 aaKnown RBP19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 NDUFA8P51970 172 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 MAPRE1Q15691 268 aaKnown RBP19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 YAF2Q8IY57 180 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 KBTBD7Q8WVZ9 684 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 RSPRY1Q96DX4 576 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 GZF1Q9H116 711 aaPredicted RBP19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 CDH9Q9ULB4 789 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 NCANO14594 1321 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 MIA3Q5JRA6 1907 aa19.98■□□□□ 0.79
CHMP1A-207ENST00000549328 MYBPHLA2RUH7 354 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 ARNTLO00327 626 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 PDXKO00764 312 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 DPYSL4O14531 572 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 TACC1O75410 805 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 STAU1O95793 577 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 F11P03951 625 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 CYP2F1P24903 491 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 TARSP26639 723 aaKnown RBP19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 MAGEA11P43364 429 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 AP3M2P53677 418 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 NLRP12P59046 1061 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 C4orf50Q6ZRC1 276 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 FRMD5Q7Z6J6 570 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 SPATA2LQ8IUW3 424 aaPredicted RBP19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 ZNF516Q92618 1163 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 MMS19Q96T76 1030 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 KCTD10Q9H3F6 313 aa19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 UXTQ9UBK9 157 aaPredicted RBP19.97■□□□□ 0.79
CHMP1A-207ENST00000549328 CACNA1IQ9P0X4 2223 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 RPN1P04843 607 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 LMO2P25791 158 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 DDX6P26196 483 aaKnown RBP eCLIP19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 ATICP31939 592 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 CLDN10P78369 228 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 CYP4F8P98187 520 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 BECN1Q14457 450 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 DDR2Q16832 855 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 ARHGAP29Q52LW3 1261 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 C1orf228Q6PIY5 440 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 TMEM150AQ86TG1 271 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 PARD3BQ8TEW8 1205 aa19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 NKD2Q969F2 451 aaPredicted RBP19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 CCDC47Q96A33 483 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 TRMT2BQ96GJ1 504 aaKnown RBP19.96■□□□□ 0.79
CHMP1A-207ENST00000549328 MSANTD3Q96H12 275 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms