RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 NDRG2Q9UN36 371 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 PCDHB8Q9UN66 801 aa16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 MAPK8IP1Q9UQF2 711 aa16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 SPAG17Q6Q759 2223 aa16.93■□□□□ 0.3
CHMP1A-206ENST00000549139 TICRRQ7Z2Z1 1910 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 ARHGEF37A1IGU5 675 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 PPEF2O14830 753 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 CYP24A1Q07973 514 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 GAS6Q14393 721 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 GRM2Q14416 872 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 PSMD6Q15008 389 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 FAM78AQ5JUQ0 283 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 ANKRD36BP1Q96IX9 119 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 TRPV5Q9NQA5 729 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 SEMA4GQ9NTN9 838 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 RAB23Q9ULC3 237 aa16.92■□□□□ 0.3
CHMP1A-206ENST00000549139 ANKRD11Q6UB99 2663 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 H7C4K7 107 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 TULP1O00294 542 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 HRO43593 1189 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 MICAL2O94851 1124 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 NR3C1P04150 777 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 TMEM191BP0C7N4 346 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 PTPN2P17706 415 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 PRCPP42785 496 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 TAF6P49848 677 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 CCR3P51677 355 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 CSRP2Q16527 193 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 DUOXA2Q1HG44 320 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 SLC8B1Q6J4K2 584 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 DSTYKQ6XUX3 929 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 PRR23CQ6ZRP0 262 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 WDR49Q8IV35 697 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 C1orf127Q8N9H9 656 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 TCEAL4Q96EI5 215 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 GBP4Q96PP9 640 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 FNBP1Q96RU3 617 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 BRD9Q9H8M2 597 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 LMAN1LQ9HAT1 526 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 ZNF334Q9HCZ1 680 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 ITGA11Q9UKX5 1188 aa16.91■□□□□ 0.3
CHMP1A-206ENST00000549139 ZZEF1O43149 2961 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 GDF9O60383 454 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 ABLIM3O94929 683 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 TNNC2P02585 160 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 CHRNB1P11230 501 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 TYMPP19971 482 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 PNPLA4P41247 253 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 CCR2P41597 374 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 SATB1Q01826 763 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 ROR1Q01973 937 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 PRR23BQ6ZRT6 265 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 SMYD4Q8IYR2 804 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 CSGALNACT2Q8N6G5 542 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 ZNF461Q8TAF7 563 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 CXorf38Q8TB03 319 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 FAM3CQ92520 227 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 IRF7Q92985 503 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 SENP8Q96LD8 212 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 ZNF560Q96MR9 790 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 ASB16Q96NS5 453 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 TRMT61BQ9BVS5 477 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 OXCT2Q9BYC2 517 aaPredicted RBP16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 ZFP14Q9HCL3 533 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 LMBRD1Q9NUN5 540 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 MAN1B1Q9UKM7 699 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 AGAP1Q9UPQ3 857 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 TSC2P49815 1807 aa16.9■□□□□ 0.3
CHMP1A-206ENST00000549139 KPNA7A9QM74 516 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 MAPK13O15264 365 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 OAZ2O95190 189 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 ITGB3P05106 788 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 TNNI1P19237 187 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 PPP1R2P41236 205 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 CXCL12P48061 93 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 RBP5P82980 135 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 YWHAHQ04917 246 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 DMWDQ09019 674 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 PPP2R5DQ14738 602 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 EDRF1Q3B7T1 1238 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 SV2CQ496J9 727 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 ZCWPW2Q504Y3 356 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 LMBRD2Q68DH5 695 aaPredicted RBP16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 CENPPQ6IPU0 288 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 VITQ6UXI7 678 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 LRRC52Q8N7C0 313 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 OR5B17Q8NGF7 314 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 CCDC127Q96BQ5 260 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 ZSWIM3Q96MP5 696 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 CGRRF1Q99675 332 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 MTMR12Q9C0I1 747 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 FRMD4BQ9Y2L6 1034 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 PIAS3Q9Y6X2 628 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 ASPMQ8IZT6 3477 aa16.89■□□□□ 0.29
CHMP1A-206ENST00000549139 GREB1Q4ZG55 1949 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 WDR27A2RRH5 827 aa16.88■□□□□ 0.29
CHMP1A-206ENST00000549139 ARNTLO00327 626 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms