RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 SPECC1L-ADORA2AF8WAN1 911 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 TULP1O00294 542 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 DPYSL4O14531 572 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 KIAA0391O15091 583 aaKnown RBP18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 HUS1O60921 280 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 YEATS4O95619 227 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 TMEM191BP0C7N4 346 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 ACAT1P24752 427 aaKnown RBP18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 KPNA1P52294 538 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 NLRP12P59046 1061 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 GAS6Q14393 721 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 NFE2Q16621 373 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 LMBRD2Q68DH5 695 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 C1orf228Q6PIY5 440 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 SHC4Q6S5L8 630 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 STXBP4Q6ZWJ1 553 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 CBWD2Q8IUF1 395 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 ADGRF2Q8IZF7 708 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 BPIFB1Q8TDL5 484 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 DHX58Q96C10 678 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 ZNF396Q96N95 335 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 ACBD6Q9BR61 282 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 PI4K2AQ9BTU6 479 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 SLC46A2Q9BY10 475 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 FAM126AQ9BYI3 521 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 CUEDC2Q9H467 287 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 C8orf33Q9H7E9 229 aaPredicted RBP18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 ABCB6Q9NP58 842 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 DDX43Q9NXZ2 648 aaKnown RBP18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 GTSE1Q9NYZ3 720 aa18.7■□□□□ 0.58
CHMP1A-205ENST00000548650 HCRTO43612 131 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 TADA3O75528 432 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 F11P03951 625 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 KRT19P08727 400 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 CCR3P51677 355 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 RBP5P82980 135 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 MYL7Q01449 175 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 TAF12Q16514 161 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 CNNM4Q6P4Q7 775 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 EPM2AIP1Q7L775 607 aaPredicted RBP18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 RALGPS2Q86X27 583 aaPredicted RBP18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 CMTM8Q8IZV2 173 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 CSGALNACT2Q8N6G5 542 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 TOP6BLQ8N6T0 577 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 OR5B17Q8NGF7 314 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 SPATA18Q8TC71 538 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 SNX21Q969T3 373 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 LRRC27Q9C0I9 530 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 RBM12Q9NTZ6 932 aaKnown RBP18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 INTS13Q9NVM9 706 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 TFIP11Q9UBB9 837 aaKnown RBP18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 ZMYM5Q9UJ78 669 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 SNX9Q9Y5X1 595 aa18.69■□□□□ 0.58
CHMP1A-205ENST00000548650 GABRDO14764 452 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 EIF3DO15371 548 aaKnown RBP eCLIP18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 CUTAO60888 179 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 PRPF40AO75400 957 aaKnown RBP18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 ASIC1P78348 528 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 PLCB2Q00722 1185 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 FOXK2Q01167 660 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 SATB1Q01826 763 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 TNK2Q07912 1038 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 LRRC32Q14392 662 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 SOWAHAQ2M3V2 549 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 SDHAF4Q5VUM1 108 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 Q6ZS52 159 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 CELF5Q8N6W0 485 aaKnown RBP18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 TTC8Q8TAM2 541 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 RMDN1Q96DB5 314 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 HSPBP1Q9NZL4 362 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 CCL26Q9Y258 94 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 DNAH14Q0VDD8 3507 aa18.68■□□□□ 0.58
CHMP1A-205ENST00000548650 NOL4O94818 638 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 CSH1P0DML2 217 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 CSH2P0DML3 217 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 CYP2F1P24903 491 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 DDX6P26196 483 aaKnown RBP eCLIP18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 EHHADHQ08426 723 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 CFAP221Q4G0U5 840 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 FAM26FQ5R3K3 315 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 ERMP1Q7Z2K6 904 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 LIMS2Q7Z4I7 341 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 SPEM1Q8N4L4 309 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 RIN3Q8TB24 985 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 KBTBD7Q8WVZ9 684 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 USP13Q92995 863 aaPredicted RBP18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 TRMT2BQ96GJ1 504 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 ANKRD36BP1Q96IX9 119 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 AGPAT3Q9NRZ7 376 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 NCDNQ9UBB6 729 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 GTF3C4Q9UKN8 822 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 UBE4BO95155 1302 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 KIAA1549LQ6ZVL6 1849 aa18.67■□□□□ 0.58
CHMP1A-205ENST00000548650 ZNF233A6NK53 670 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 TGFB1I1O43294 461 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 PAPSS2O95340 614 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 PCSK1P29120 753 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 AVPR1AP37288 418 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 LHX1P48742 406 aa18.66■□□□□ 0.58
CHMP1A-205ENST00000548650 RPL10AP62906 217 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms