RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 OR10H5Q8NGA6 315 aa5.01□□□□□ -1.61
VPS29-205ENST00000548539 CPT1CQ8TCG5 803 aa5.01□□□□□ -1.61
VPS29-205ENST00000548539 ST8SIA2Q92186 375 aa5.01□□□□□ -1.61
VPS29-205ENST00000548539 UNKQ9C0B0 810 aaKnown RBP5.01□□□□□ -1.61
VPS29-205ENST00000548539 SMURF2Q9HAU4 748 aa5.01□□□□□ -1.61
VPS29-205ENST00000548539 ARFGAP3Q9NP61 516 aa5.01□□□□□ -1.61
VPS29-205ENST00000548539 STARD7Q9NQZ5 370 aa5.01□□□□□ -1.61
VPS29-205ENST00000548539 MRPS18AQ9NVS2 196 aaKnown RBP5.01□□□□□ -1.61
VPS29-205ENST00000548539 PROB1E7EW31 1015 aa5□□□□□ -1.61
VPS29-205ENST00000548539 APOL1O14791 398 aa5□□□□□ -1.61
VPS29-205ENST00000548539 TCEA3O75764 348 aa5□□□□□ -1.61
VPS29-205ENST00000548539 DNAJB5O75953 348 aa5□□□□□ -1.61
VPS29-205ENST00000548539 GRPP07492 148 aa5□□□□□ -1.61
VPS29-205ENST00000548539 LAG3P18627 525 aa5□□□□□ -1.61
VPS29-205ENST00000548539 PPM1AP35813 382 aa5□□□□□ -1.61
VPS29-205ENST00000548539 CHN2P52757 468 aa5□□□□□ -1.61
VPS29-205ENST00000548539 NOMO2Q5JPE7 1267 aa5□□□□□ -1.61
VPS29-205ENST00000548539 C1QL3Q5VWW1 255 aa5□□□□□ -1.61
VPS29-205ENST00000548539 ANO1Q5XXA6 986 aa5□□□□□ -1.61
VPS29-205ENST00000548539 GPRIN1Q7Z2K8 1008 aa5□□□□□ -1.61
VPS29-205ENST00000548539 APBB1IPQ7Z5R6 666 aaPredicted RBP5□□□□□ -1.61
VPS29-205ENST00000548539 USP37Q86T82 979 aa5□□□□□ -1.61
VPS29-205ENST00000548539 MYLK4Q86YV6 388 aaPredicted RBP5□□□□□ -1.61
VPS29-205ENST00000548539 SLC15A4Q8N697 577 aa5□□□□□ -1.61
VPS29-205ENST00000548539 DNAJC5GQ8N7S2 189 aa5□□□□□ -1.61
VPS29-205ENST00000548539 RNF152Q8N8N0 203 aa5□□□□□ -1.61
VPS29-205ENST00000548539 MDGA1Q8NFP4 955 aa5□□□□□ -1.61
VPS29-205ENST00000548539 KLHL32Q96NJ5 620 aa5□□□□□ -1.61
VPS29-205ENST00000548539 TLR10Q9BXR5 811 aa5□□□□□ -1.61
VPS29-205ENST00000548539 TINAGL1Q9GZM7 467 aaPredicted RBP5□□□□□ -1.61
VPS29-205ENST00000548539 R3HDMLQ9H3Y0 253 aa5□□□□□ -1.61
VPS29-205ENST00000548539 TRMT13Q9NUP7 481 aaKnown RBP5□□□□□ -1.61
VPS29-205ENST00000548539 RLIMQ9NVW2 624 aa5□□□□□ -1.61
VPS29-205ENST00000548539 LRCH1Q9Y2L9 728 aa5□□□□□ -1.61
VPS29-205ENST00000548539 TRIM43BA6NCK2 446 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 DRGXA6NNA5 263 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 E9PLN8 166 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 FOXN3O00409 490 aaPredicted RBP4.99□□□□□ -1.61
VPS29-205ENST00000548539 NBNO60934 754 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 VPS4BO75351 444 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 KIF20AO95235 890 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 IL6STP40189 918 aaPredicted RBP4.99□□□□□ -1.61
VPS29-205ENST00000548539 UCP3P55916 312 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 BTKQ06187 659 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 LMBRD2Q68DH5 695 aaPredicted RBP4.99□□□□□ -1.61
VPS29-205ENST00000548539 NAIF1Q69YI7 327 aaPredicted RBP4.99□□□□□ -1.61
VPS29-205ENST00000548539 FBXO42Q6P3S6 717 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 MICU3Q86XE3 530 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 PDSS2Q86YH6 399 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 SYT12Q8IV01 421 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 PDPRQ8NCN5 879 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 FAM46DQ8NEK8 389 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 OR52N2Q8NGI0 321 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 TRIM43Q96BQ3 446 aaPredicted RBP4.99□□□□□ -1.61
VPS29-205ENST00000548539 NMD3Q96D46 503 aaKnown RBP4.99□□□□□ -1.61
VPS29-205ENST00000548539 MSLNLQ96KJ4 702 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 VKORC1Q9BQB6 163 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 BRIP1Q9BX63 1249 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 STK31Q9BXU1 1019 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 DPH1Q9BZG8 443 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 WDR12Q9GZL7 423 aaKnown RBP4.99□□□□□ -1.61
VPS29-205ENST00000548539 GPR35Q9HC97 309 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 ITGB1BP2Q9UKP3 347 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 CDYLQ9Y232 598 aa4.99□□□□□ -1.61
VPS29-205ENST00000548539 SCAF4O95104 1147 aaKnown RBP4.98□□□□□ -1.61
VPS29-205ENST00000548539 SLC11A2P49281 568 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 PTTG1IPP53801 180 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 HTRA4P83105 476 aaPredicted RBP4.98□□□□□ -1.61
VPS29-205ENST00000548539 RAB32Q13637 225 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 SLC44A4Q53GD3 710 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 DGKKQ5KSL6 1271 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 DCAF12L1Q5VU92 463 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 RRAGBQ5VZM2 374 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 Q6YL49 198 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 MICALCLQ6ZW33 695 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 UNC13DQ70J99 1090 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 TXLNBQ8N3L3 684 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 ATP11CQ8NB49 1132 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 NSUN7Q8NE18 718 aaKnown RBP4.98□□□□□ -1.61
VPS29-205ENST00000548539 OR56A3Q8NH54 315 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 NELL1Q92832 810 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 SCAMP4Q969E2 229 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 SNX22Q96L94 193 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 ZNF518BQ9C0D4 1074 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 TBC1D23Q9NUY8 699 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 PADI4Q9UM07 663 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 TBC1D30Q9Y2I9 924 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 TMX2Q9Y320 296 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 PLEKHM1Q9Y4G2 1056 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 INSL6Q9Y581 213 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 CEP83Q9Y592 693 aa4.98□□□□□ -1.61
VPS29-205ENST00000548539 PYCARD-AS1I3L0S3 204 aa4.97□□□□□ -1.61
VPS29-205ENST00000548539 MYO1CO00159 1063 aa4.97□□□□□ -1.61
VPS29-205ENST00000548539 LEFTY2O00292 366 aa4.97□□□□□ -1.61
VPS29-205ENST00000548539 CREB3O43889 395 aa4.97□□□□□ -1.61
VPS29-205ENST00000548539 FGF18O76093 207 aa4.97□□□□□ -1.61
VPS29-205ENST00000548539 MT-ND5P03915 603 aa4.97□□□□□ -1.61
VPS29-205ENST00000548539 ANXA1P04083 346 aa4.97□□□□□ -1.61
VPS29-205ENST00000548539 PIM1P11309 404 aaPredicted RBP4.97□□□□□ -1.61
VPS29-205ENST00000548539 FCER1AP12319 257 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms