RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 SPATA18Q8TC71 538 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 SPPL2BQ8TCT7 592 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 KBTBD7Q8WVZ9 684 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 DNASE1L2Q92874 299 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 SHDQ96IW2 340 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 LRRC3BQ96PB8 259 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 ACBD6Q9BR61 282 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 OSBPL6Q9BZF3 934 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 GPR88Q9GZN0 384 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 KIAA1586Q9HCI6 787 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 DDX43Q9NXZ2 648 aaKnown RBP11.08□□□□□ -0.64
BEST3-208ENST00000547208 ABI2Q9NYB9 513 aaPredicted RBP11.08□□□□□ -0.64
BEST3-208ENST00000547208 SNX9Q9Y5X1 595 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 F5P12259 2224 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 SPTBN2O15020 2390 aa11.08□□□□□ -0.64
BEST3-208ENST00000547208 HEPACAM2A8MVW5 462 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
BEST3-208ENST00000547208 HUS1O60921 280 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 GABBR2O75899 941 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 KRT37O76014 449 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 HMGA1P17096 107 aaKnown RBP11.07□□□□□ -0.64
BEST3-208ENST00000547208 PSMC3P17980 439 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 RFX1P22670 979 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 ACAT1P24752 427 aaKnown RBP11.07□□□□□ -0.64
BEST3-208ENST00000547208 TARSP26639 723 aaKnown RBP11.07□□□□□ -0.64
BEST3-208ENST00000547208 GABRR2P28476 465 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 GPR15P49685 360 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 CYP2J2P51589 502 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 KRT85P78386 507 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 CYP24A1Q07973 514 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 STK4Q13043 487 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 PSMD6Q15008 389 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 DUOXA2Q1HG44 320 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 INTS6LQ5JSJ4 861 aaKnown RBP11.07□□□□□ -0.64
BEST3-208ENST00000547208 TPRG1Q6ZUI0 275 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 ITIH5Q86UX2 942 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 MFSD6LQ8IWD5 586 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 DCP1BQ8IZD4 617 aaKnown RBP11.07□□□□□ -0.64
BEST3-208ENST00000547208 ADGRF2Q8IZF7 708 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 MAML2Q8IZL2 1156 aaPredicted RBP11.07□□□□□ -0.64
BEST3-208ENST00000547208 XXYLT1Q8NBI6 393 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 RDH13Q8NBN7 331 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 PLEKHO2Q8TD55 490 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 GIPC2Q8TF65 315 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 TMEM174Q8WUU8 243 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 DEPDC1BQ8WUY9 529 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 ZNF516Q92618 1163 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 HPDLQ96IR7 371 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 ANKRD36BP1Q96IX9 119 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 SPATA32Q96LK8 384 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 TRMT61BQ9BVS5 477 aaKnown RBP11.07□□□□□ -0.64
BEST3-208ENST00000547208 ABCB6Q9NP58 842 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 LTB4R2Q9NPC1 389 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 TRPV5Q9NQA5 729 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 NME7Q9Y5B8 376 aa11.07□□□□□ -0.64
BEST3-208ENST00000547208 NCOR2Q9Y618 2525 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 CACNA1BQ00975 2339 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 RIOK3O14730 519 aaKnown RBP11.06□□□□□ -0.64
BEST3-208ENST00000547208 PRAMEF12O95522 483 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 FGF19O95750 216 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 CST3P01034 146 aaPredicted RBP11.06□□□□□ -0.64
BEST3-208ENST00000547208 TNNC2P02585 160 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 WEE1P30291 646 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 GDI1P31150 447 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 NDUFA8P51970 172 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 CYP4F8P98187 520 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 TSPY1Q01534 308 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 FCHO2Q0JRZ9 810 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 VEPH1Q14D04 833 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 NFE2Q16621 373 aaPredicted RBP11.06□□□□□ -0.64
BEST3-208ENST00000547208 KMT5BQ4FZB7 885 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 GPR158Q5T848 1215 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 FAM171BQ6P995 826 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 DPH6Q7L8W6 267 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 HS2ST1Q7LGA3 356 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 TRAPPC11Q7Z392 1133 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 GPIHBP1Q8IV16 184 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 ARID3BQ8IVW6 561 aaPredicted RBP11.06□□□□□ -0.64
BEST3-208ENST00000547208 CEP57L1Q8IYX8 460 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 STKLD1Q8NE28 680 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 CLDN23Q96B33 292 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 CCDC127Q96BQ5 260 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 CGRRF1Q99675 332 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 PI4K2AQ9BTU6 479 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 KCTD10Q9H3F6 313 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 ATXN3LQ9H3M9 355 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 SLITRK6Q9H5Y7 841 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 BRD9Q9H8M2 597 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 DMAC2Q9NW81 257 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 CGNQ9P2M7 1197 aaKnown RBP11.06□□□□□ -0.64
BEST3-208ENST00000547208 GTF3C4Q9UKN8 822 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 PCDHB5Q9Y5E4 795 aa11.06□□□□□ -0.64
BEST3-208ENST00000547208 MYBPHLA2RUH7 354 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 FAM170BA6NMN3 283 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 ATP2C2O75185 946 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 TADA3O75528 432 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 F11P03951 625 aa11.05□□□□□ -0.64
BEST3-208ENST00000547208 DLATP10515 647 aaKnown RBP11.05□□□□□ -0.64
BEST3-208ENST00000547208 CYP2F1P24903 491 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms