RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 KIF20AO95235 890 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 ARIH2O95376 493 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 NTN1O95631 604 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 CHEK2O96017 543 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 RARBP10826 455 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 FOXG1P55316 489 aaPredicted RBP5.41□□□□□ -1.54
CCDC38-204ENST00000546816 SUPT20HL1Q3ZLR7 823 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 CEP78Q5JTW2 689 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 SLC18B1Q6NT16 456 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 HEATR3Q7Z4Q2 680 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 PPP1R32Q7Z5V6 425 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 CPA6Q8N4T0 437 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 DENND1AQ8TEH3 1009 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 WACQ9BTA9 647 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 ACTRT3Q9BYD9 372 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 TPSD1Q9BZJ3 242 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 WDCPQ9H6R7 721 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 TBC1D30Q9Y2I9 924 aa5.41□□□□□ -1.54
CCDC38-204ENST00000546816 VPS4BO75351 444 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 TOP3BO95985 862 aaKnown RBP5.4□□□□□ -1.54
CCDC38-204ENST00000546816 SFPQP23246 707 aaKnown RBP eCLIP5.4□□□□□ -1.54
CCDC38-204ENST00000546816 MAP2K6P52564 334 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 BOP1Q14137 746 aaKnown RBP5.4□□□□□ -1.54
CCDC38-204ENST00000546816 THEMIS2Q5TEJ8 643 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 TECPR1Q7Z6L1 1165 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 USP37Q86T82 979 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 PPP1R3BQ86XI6 285 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 FAM109AQ8N4B1 249 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 TNPO1Q92973 898 aaKnown RBP5.4□□□□□ -1.54
CCDC38-204ENST00000546816 RGMAQ96B86 450 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 SH2D3AQ9BRG2 576 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 CNPPD1Q9BV87 410 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 TINAGL1Q9GZM7 467 aaPredicted RBP5.4□□□□□ -1.54
CCDC38-204ENST00000546816 HOMER2Q9NSB8 354 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 ZDHHC8Q9ULC8 765 aa5.4□□□□□ -1.54
CCDC38-204ENST00000546816 MYO1FO00160 1098 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 PPEF2O14830 753 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 AHSGP02765 367 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 FTLP02792 175 aaPredicted RBP5.39□□□□□ -1.55
CCDC38-204ENST00000546816 TUBB4AP04350 444 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 FAM163BP0C2L3 166 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 CYP2D6P10635 497 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 TYRP14679 529 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 CHRM3P20309 590 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 FHL1Q13642 323 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 TBCCQ15814 346 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 RBM20Q5T481 1227 aaKnown RBP5.39□□□□□ -1.55
CCDC38-204ENST00000546816 AWAT2Q6E213 333 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 ZNF517Q6ZMY9 492 aaPredicted RBP5.39□□□□□ -1.55
CCDC38-204ENST00000546816 CATIPQ7Z7H3 387 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 TBC1D5Q92609 795 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 GTPBP4Q9BZE4 634 aaKnown RBP5.39□□□□□ -1.55
CCDC38-204ENST00000546816 ARHGEF3Q9NR81 526 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 SH3BP4Q9P0V3 963 aa5.39□□□□□ -1.55
CCDC38-204ENST00000546816 SOAT2O75908 522 aa5.38□□□□□ -1.55
CCDC38-204ENST00000546816 CCT4P50991 539 aaKnown RBP5.38□□□□□ -1.55
CCDC38-204ENST00000546816 PRAMEF17Q5VTA0 474 aa5.38□□□□□ -1.55
CCDC38-204ENST00000546816 HSPBAP1Q96EW2 488 aa5.38□□□□□ -1.55
CCDC38-204ENST00000546816 GPATCH3Q96I76 525 aa5.38□□□□□ -1.55
CCDC38-204ENST00000546816 TCF7L1Q9HCS4 588 aa5.38□□□□□ -1.55
CCDC38-204ENST00000546816 LMBRD1Q9NUN5 540 aa5.38□□□□□ -1.55
CCDC38-204ENST00000546816 FEZ2Q9UHY8 353 aaPredicted RBP5.38□□□□□ -1.55
CCDC38-204ENST00000546816 LUC7L2Q9Y383 392 aaKnown RBP5.38□□□□□ -1.55
CCDC38-204ENST00000546816 PCDHA1Q9Y5I3 950 aa5.38□□□□□ -1.55
CCDC38-204ENST00000546816 CACNA1IQ9P0X4 2223 aa5.38□□□□□ -1.55
CCDC38-204ENST00000546816 PRRT4C9JH25 899 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 ADAMTS3O15072 1205 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 DTNBO60941 627 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 NXPH3O95157 252 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 IL33O95760 270 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 NDUFB7P17568 137 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 NKX6-1P78426 367 aaPredicted RBP5.37□□□□□ -1.55
CCDC38-204ENST00000546816 GPR162Q16538 588 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 PGS1Q32NB8 556 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 KLHL22Q53GT1 634 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 AARS2Q5JTZ9 985 aaKnown RBP5.37□□□□□ -1.55
CCDC38-204ENST00000546816 VPS53Q5VIR6 699 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 SLC2A7Q6PXP3 512 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 KLHDC4Q8TBB5 520 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 FAM136AQ96C01 138 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 CHMP4CQ96CF2 233 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 SPRTNQ9H040 489 aaPredicted RBP5.37□□□□□ -1.55
CCDC38-204ENST00000546816 SIK2Q9H0K1 926 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 SERHLQ9NQF3 203 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 ANLNQ9NQW6 1124 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.37□□□□□ -1.55
CCDC38-204ENST00000546816 PNPOQ9NVS9 261 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 ELOVL5Q9NYP7 299 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 RAD54BQ9Y620 910 aa5.37□□□□□ -1.55
CCDC38-204ENST00000546816 H0YIZ8 118 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 M0QYG6 137 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 HDCP19113 662 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 ITGALP20701 1170 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 AKAP5P24588 427 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 NR4A2P43354 598 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 GCLCP48506 637 aaPredicted RBP5.36□□□□□ -1.55
CCDC38-204ENST00000546816 PLS1Q14651 629 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 PTPROQ16827 1216 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 ANKRD16Q6P6B7 361 aa5.36□□□□□ -1.55
CCDC38-204ENST00000546816 SLC29A4Q7RTT9 530 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms