RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TARS2Q9BW92 718 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 KBTBD4Q9NVX7 518 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 AKAP7Q9P0M2 348 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 H0Y626 953 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 PGRMC1O00264 195 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 LZTS3O60299 673 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 CSDE1O75534 798 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 RHOBTB3O94955 611 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 IL18RAPO95256 599 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 TTC4O95801 387 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 CUL1Q13616 776 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 TLK2Q86UE8 772 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 ADSSL1Q8N142 457 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 SYT2Q8N9I0 419 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 NOA1Q8NC60 698 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 TRAPPC12Q8WVT3 735 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 CFAP36Q96G28 342 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 GBP5Q96PP8 586 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 NT5C1AQ9BXI3 368 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 PDGFCQ9NRA1 345 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 RBPJLQ9UBG7 517 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 EMSYQ7Z589 1322 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 CABYRO75952 493 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 MAP4P27816 1152 aaKnown RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 PLTPP55058 493 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 NCOA4Q13772 614 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 HP1BP3Q5SSJ5 553 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 MAP3K21Q5TCX8 1036 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 GPR142Q7Z601 462 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 DEPDC1BQ8WUY9 529 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 SLC5A5Q92911 643 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 C18orf8Q96DM3 657 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 MTMR8Q96EF0 704 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 KCNMB3Q9NPA1 279 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 BLOC1S4Q9NUP1 217 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.01□□□□□ -0.97
CLIP1-218ENST00000545889 AIPL1Q9NZN9 384 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 USP20Q9Y2K6 914 aa9.01□□□□□ -0.97
CLIP1-218ENST00000545889 GOLGA4Q13439 2230 aaKnown RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 CASQ2O14958 399 aaPredicted RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 THP07101 528 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 HIST1H2AGP0C0S8 130 aaPredicted RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 FAM200BP0CF97 657 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 HIST1H2ADP20671 130 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 GNL1P36915 607 aaPredicted RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 SCNN1BP51168 640 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 CDH6P55285 790 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 MTF1Q14872 753 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 NFE2Q16621 373 aaPredicted RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 SGSM1Q2NKQ1 1148 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 MIB1Q86YT6 1006 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 MFN1Q8IWA4 741 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 PYROXD1Q8WU10 500 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 HNRNPLLQ8WVV9 542 aaKnown RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 HIST1H2AHQ96KK5 128 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 HIST1H2AJQ99878 128 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 H2AFJQ9BTM1 129 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 ANKZF1Q9H8Y5 726 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 LATS2Q9NRM7 1088 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 SENP1Q9P0U3 644 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 SUN2Q9UH99 717 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 L3MBTL1Q9Y468 752 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 GNGT2O14610 69 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 ANP32DO95626 131 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 CYP3A4P08684 503 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 HSPA8P11142 646 aaKnown RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 UBA1P22314 1058 aaKnown RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 RBL2Q08999 1139 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 FSCN1Q16658 493 aaKnown RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 TRIM65Q6PJ69 517 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 TRIM72Q6ZMU5 477 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 ANKS3Q6ZW76 656 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 KDELC2Q7Z4H8 507 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 C4orf32Q8N8J7 132 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 LRRC8CQ8TDW0 803 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 FBXO32Q969P5 355 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 VCX3AQ9NNX9 186 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 SETD4Q9NVD3 440 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 KLHL14Q9P2G3 628 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 NID2Q14112 1375 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 CFAP69A5D8W1 941 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 PIK3R2O00459 728 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 TXNDC9O14530 226 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 DDHD2O94830 711 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 NDUFV1P49821 464 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 CCL23P55773 120 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 SESN3P58005 492 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 GUCY2DQ02846 1103 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 ITGB3BPQ13352 177 aaPredicted RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 HABP4Q5JVS0 413 aaKnown RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 ITIH5Q86UX2 942 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 ARHGAP18Q8N392 663 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 RNF25Q96BH1 459 aaPredicted RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 C12orf42Q96LP6 360 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 HEMGNQ9BXL5 484 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 MRPL9Q9BYD2 267 aaKnown RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 TRIM45Q9H8W5 580 aaPredicted RBP9□□□□□ -0.97
CLIP1-218ENST00000545889 ZNF536O15090 1300 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 PSMD10O75832 226 aa9□□□□□ -0.97
CLIP1-218ENST00000545889 FTCDO95954 541 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms