RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 TRPC3Q13507 836 aa14.91□□□□□ -0.02
VAMP1-208ENST00000544432 SNW1Q13573 536 aaKnown RBP14.91□□□□□ -0.02
VAMP1-208ENST00000544432 TEAD2Q15562 447 aa14.91□□□□□ -0.02
VAMP1-208ENST00000544432 MAPRE1Q15691 268 aaKnown RBP14.91□□□□□ -0.02
VAMP1-208ENST00000544432 SLC44A4Q53GD3 710 aa14.91□□□□□ -0.02
VAMP1-208ENST00000544432 GAREM2Q75VX8 874 aa14.91□□□□□ -0.02
VAMP1-208ENST00000544432 SYAP1Q96A49 352 aaPredicted RBP14.91□□□□□ -0.02
VAMP1-208ENST00000544432 LPIN3Q9BQK8 851 aa14.91□□□□□ -0.02
VAMP1-208ENST00000544432 XYLT2Q9H1B5 865 aa14.91□□□□□ -0.02
VAMP1-208ENST00000544432 ZNF334Q9HCZ1 680 aaPredicted RBP14.91□□□□□ -0.02
VAMP1-208ENST00000544432 TRPV5Q9NQA5 729 aa14.91□□□□□ -0.02
VAMP1-208ENST00000544432 GTF3C4Q9UKN8 822 aa14.91□□□□□ -0.02
VAMP1-208ENST00000544432 CIZ1Q9ULV3 898 aaPredicted RBP14.91□□□□□ -0.02
VAMP1-208ENST00000544432 CA14Q9ULX7 337 aa14.91□□□□□ -0.02
VAMP1-208ENST00000544432 FRMD4BQ9Y2L6 1034 aa14.91□□□□□ -0.02
VAMP1-208ENST00000544432 LRRIQ3A6PVS8 624 aaPredicted RBP14.9□□□□□ -0.02
VAMP1-208ENST00000544432 SOBPA7XYQ1 873 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 PI15O43692 258 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 C4BPAP04003 597 aaKnown RBP14.9□□□□□ -0.02
VAMP1-208ENST00000544432 CSH1P0DML2 217 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 CSH2P0DML3 217 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 GJA1P17302 382 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 ACAT1P24752 427 aaKnown RBP14.9□□□□□ -0.02
VAMP1-208ENST00000544432 GABRR2P28476 465 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 CDC25CP30307 473 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 MAGEA11P43364 429 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 CASP4P49662 377 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 MCCD1P59942 119 aaPredicted RBP14.9□□□□□ -0.02
VAMP1-208ENST00000544432 FAM160A1Q05DH4 1040 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 WDR72Q3MJ13 1102 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 C4orf50Q6ZRC1 276 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 MFSD6LQ8IWD5 586 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 ELOA2Q8IYF1 753 aaPredicted RBP14.9□□□□□ -0.02
VAMP1-208ENST00000544432 SPATA20Q8TB22 786 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 ZSCAN18Q8TBC5 510 aaPredicted RBP14.9□□□□□ -0.02
VAMP1-208ENST00000544432 FAM200AQ8TCP9 573 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 DEPDC1BQ8WUY9 529 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 CEP295NLQ96MC4 621 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 TIGD1Q96MW7 591 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 GSDMAQ96QA5 445 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 MMS19Q96T76 1030 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 SYT15Q9BQS2 421 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 PI4K2AQ9BTU6 479 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 DDX23Q9BUQ8 820 aaKnown RBP14.9□□□□□ -0.02
VAMP1-208ENST00000544432 TRMT61BQ9BVS5 477 aaKnown RBP14.9□□□□□ -0.02
VAMP1-208ENST00000544432 GTPBP4Q9BZE4 634 aaKnown RBP14.9□□□□□ -0.02
VAMP1-208ENST00000544432 ATXN3LQ9H3M9 355 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 TBC1D17Q9HA65 648 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 IL21Q9HBE4 155 aa14.9□□□□□ -0.02
VAMP1-208ENST00000544432 MYBPHLA2RUH7 354 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 PHACTR2O75167 634 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 HMGA1P17096 107 aaKnown RBP14.89□□□□□ -0.03
VAMP1-208ENST00000544432 PSMC3P17980 439 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 LMO2P25791 158 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 RPL13P26373 211 aaKnown RBP14.89□□□□□ -0.03
VAMP1-208ENST00000544432 GNL1P36915 607 aaPredicted RBP14.89□□□□□ -0.03
VAMP1-208ENST00000544432 MYL6P60660 151 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 TNNC1P63316 161 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 MLF2Q15773 248 aaPredicted RBP14.89□□□□□ -0.03
VAMP1-208ENST00000544432 TAF12Q16514 161 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 ZACNQ401N2 412 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 ARHGAP15Q53QZ3 475 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 COBLL1Q53SF7 1204 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 TDRD10Q5VZ19 366 aaKnown RBP14.89□□□□□ -0.03
VAMP1-208ENST00000544432 VITQ6UXI7 678 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 SPATA2LQ8IUW3 424 aaPredicted RBP14.89□□□□□ -0.03
VAMP1-208ENST00000544432 GIPC2Q8TF65 315 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 DNASE1L2Q92874 299 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 MKNK1Q9BUB5 465 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 OSBPL6Q9BZF3 934 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 SLITRK6Q9H5Y7 841 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 TASP1Q9H6P5 420 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 RMND1Q9NWS8 449 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 OBP2AQ9NY56 170 aa14.89□□□□□ -0.03
VAMP1-208ENST00000544432 STK25O00506 426 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 F11P03951 625 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 CYP2F1P24903 491 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 DDX6P26196 483 aaKnown RBP eCLIP14.88□□□□□ -0.03
VAMP1-208ENST00000544432 VIPR2P41587 438 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 NCOA4Q13772 614 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 SGSM1Q2NKQ1 1148 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 EDRF1Q3B7T1 1238 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 ZCWPW2Q504Y3 356 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 GPR158Q5T848 1215 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 CEP135Q66GS9 1140 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 VSTM1Q6UX27 236 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 ARID3BQ8IVW6 561 aaPredicted RBP14.88□□□□□ -0.03
VAMP1-208ENST00000544432 CCDC105Q8IYK2 499 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 MYCBPAPQ8TBZ2 947 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 TAF4BQ92750 862 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 IRF7Q92985 503 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 TRMT2BQ96GJ1 504 aaKnown RBP14.88□□□□□ -0.03
VAMP1-208ENST00000544432 MYRFLQ96LU7 910 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 GCNAQ96QF7 691 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 MRPL45Q9BRJ2 306 aaKnown RBP14.88□□□□□ -0.03
VAMP1-208ENST00000544432 SNX25Q9H3E2 840 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 CRTAC1Q9NQ79 661 aa14.88□□□□□ -0.03
VAMP1-208ENST00000544432 MAGEC2Q9UBF1 373 aaPredicted RBP14.88□□□□□ -0.03
VAMP1-208ENST00000544432 UXTQ9UBK9 157 aaPredicted RBP14.88□□□□□ -0.03
VAMP1-208ENST00000544432 HOOK1Q9UJC3 728 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms