RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 KIAA1257Q9ULG3 409 aa9.21□□□□□ -0.94
THBS3-210ENST00000541576 CASTOR2A6NHX0 329 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 PDE2AO00408 941 aaPredicted RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 HSPA1AP0DMV8 641 aaKnown RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 HSPA1BP0DMV9 641 aaKnown RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 RPL9P32969 192 aaKnown RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 SGO2Q562F6 1265 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 LLGL2Q6P1M3 1020 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 GLB1LQ6UWU2 654 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 MON1BQ7L1V2 547 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 DPH6Q7L8W6 267 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 DAAM2Q86T65 1068 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 UNC93AQ86WB7 457 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 PHF13Q86YI8 300 aaPredicted RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 SYCE1Q8N0S2 351 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 C1orf131Q8NDD1 294 aaKnown RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 CALR3Q96L12 384 aaKnown RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 C11orf70Q9BRQ4 267 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 PPP1R12CQ9BZL4 782 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 ZNF518BQ9C0D4 1074 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 CENPHQ9H3R5 247 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 ADAM22Q9P0K1 906 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 L1RE1Q9UN81 338 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 HYOU1Q9Y4L1 999 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 A8MXQ7 604 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 CDH5P33151 784 aaPredicted RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 DNA2P51530 1060 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 HADHBP55084 474 aaKnown RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 CCL23P55773 120 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 LIN9Q5TKA1 542 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 FBXW10Q5XX13 1052 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 FAM43BQ6ZT52 329 aaPredicted RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 WDTC1Q8N5D0 677 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 TOP6BLQ8N6T0 577 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 KBTBD7Q8WVZ9 684 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 APBB2Q92870 758 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 SCLYQ96I15 445 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 VCPIP1Q96JH7 1222 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 OSBPL9Q96SU4 736 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 NUP85Q9BW27 656 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 AVENQ9NQS1 362 aaPredicted RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 UVRAGQ9P2Y5 699 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 ATP11BQ9Y2G3 1177 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 TDRD15B5MCY1 1934 aaKnown RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 CYB561D2O14569 222 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 INPPL1O15357 1258 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 PARNO95453 639 aaKnown RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 PRLRP16471 622 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 RRM1P23921 792 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 GNL1P36915 607 aaPredicted RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 C1QBPQ07021 282 aaKnown RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 TUSC3Q13454 348 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 CNGA2Q16280 664 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 UPP1Q16831 310 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 WHAMMP3Q1A5X7 153 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 DENND1BQ6P3S1 775 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 MMS22LQ6ZRQ5 1243 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 LIMS2Q7Z4I7 341 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 CREG2Q8IUH2 290 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 ADGRF2Q8IZF7 708 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 ZNF564Q8TBZ8 553 aaPredicted RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 EXOC4Q96A65 974 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
THBS3-210ENST00000541576 WNT8AQ9H1J5 351 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 LHX5Q9H2C1 402 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 SNX25Q9H3E2 840 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 TMEM161AQ9NX61 479 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.2□□□□□ -0.94
THBS3-210ENST00000541576 STXBP5LQ9Y2K9 1186 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 NME7Q9Y5B8 376 aa9.2□□□□□ -0.94
THBS3-210ENST00000541576 H0YHG0 523 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 O00370 1275 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 ENPP3O14638 875 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 MTA2O94776 668 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 MMP8P22894 467 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 PTP4A2Q12974 167 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 ACOT1Q86TX2 421 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 NT5DC3Q86UY8 548 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 RABGGTAQ92696 567 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 PAWRQ96IZ0 340 aaKnown RBP9.19□□□□□ -0.94
THBS3-210ENST00000541576 PAAF1Q9BRP4 392 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 DNAI2Q9GZS0 605 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 C11orf49Q9H6J7 331 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 SMARCAL1Q9NZC9 954 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 M0QYV0 167 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 MICAL2O94851 1124 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 CALB1P05937 261 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 CHRM1P11229 460 aaPredicted RBP9.19□□□□□ -0.94
THBS3-210ENST00000541576 FGFR1P11362 822 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 CYP2C18P33260 490 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 CCT5P48643 541 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 VSNL1P62760 191 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 STILQ15468 1287 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 CLLU1OSQ5K130 101 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 PEX26Q7Z412 305 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 ERICH1Q86X53 443 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 CPNE8Q86YQ8 564 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 C12orf29Q8N999 325 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 C3orf58Q8NDZ4 430 aa9.19□□□□□ -0.94
THBS3-210ENST00000541576 URGCPQ8TCY9 931 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms