RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 FAM83AQ86UY5 434 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 PPHLN1Q8NEY8 458 aaKnown RBP15.18■□□□□ 0.02
CACNB1-206ENST00000539338 RTFDC1Q9BY42 306 aaPredicted RBP15.18■□□□□ 0.02
CACNB1-206ENST00000539338 NDFIP2Q9NV92 336 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 PAK5Q9P286 719 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 IGF2BP3O00425 579 aaKnown RBP eCLIP15.18■□□□□ 0.02
CACNB1-206ENST00000539338 GPD1P21695 349 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 CORO7P57737 925 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
CACNB1-206ENST00000539338 RARS2Q5T160 578 aaKnown RBP15.18■□□□□ 0.02
CACNB1-206ENST00000539338 KCTD17Q8N5Z5 321 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 ZNF507Q8TCN5 953 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 POP1Q99575 1024 aaKnown RBP15.18■□□□□ 0.02
CACNB1-206ENST00000539338 THTPAQ9BU02 230 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 FOXP3Q9BZS1 431 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 TADA2AO75478 443 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 AARSP49588 968 aaKnown RBP eCLIP15.18■□□□□ 0.02
CACNB1-206ENST00000539338 CASP7P55210 303 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 ORC1Q13415 861 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 CUL2Q13617 745 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 USP10Q14694 798 aaKnown RBP15.18■□□□□ 0.02
CACNB1-206ENST00000539338 EVA1BQ9NVM1 165 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 AURKCQ9UQB9 309 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 TRAF3IP3Q9Y228 551 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 A0A087X0B3 334 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 SYCE1LA8MT33 242 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 EEF2KO00418 725 aaKnown RBP15.18■□□□□ 0.02
CACNB1-206ENST00000539338 CTSHP09668 335 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 ANO4Q32M45 955 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 XPNPEP3Q9NQH7 507 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 PXDNQ92626 1479 aa15.18■□□□□ 0.02
CACNB1-206ENST00000539338 ENO3P13929 434 aaPredicted RBP15.17■□□□□ 0.02
CACNB1-206ENST00000539338 GFAPP14136 432 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 KCNA2P16389 499 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 PRLRP16471 622 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 TAL1P17542 331 aaPredicted RBP15.17■□□□□ 0.02
CACNB1-206ENST00000539338 CPA2P48052 419 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 FNTAP49354 379 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 FAXCQ5TGI0 409 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 KIAA0895Q8NCT3 520 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 TMA16Q96EY4 203 aaKnown RBP15.17■□□□□ 0.02
CACNB1-206ENST00000539338 FAM8A1Q9UBU6 413 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 HNRNPCL1O60812 293 aaKnown RBP15.17■□□□□ 0.02
CACNB1-206ENST00000539338 CYBBP04839 570 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 SNRPAP09012 282 aaKnown RBP15.17■□□□□ 0.02
CACNB1-206ENST00000539338 GOLGA7BQ2TAP0 167 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 TASP1Q9H6P5 420 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 EFCAB14O75071 495 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 GRK4P32298 578 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 NLRP11P59045 1033 aaKnown RBP15.17■□□□□ 0.02
CACNB1-206ENST00000539338 PPIL6Q8IXY8 311 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 MYCBPAPQ8TBZ2 947 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 MED15Q96RN5 788 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.17■□□□□ 0.02
CACNB1-206ENST00000539338 MROH1Q8NDA8 1641 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 B2RBV5 119 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 SREBF1P36956 1147 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 SERPINB9P50453 376 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 CYTH1Q15438 398 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 MROH9Q5TGP6 573 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 SLC20A1Q8WUM9 679 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 MANSC1Q9H8J5 431 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 DYRK4Q9NR20 520 aa15.17■□□□□ 0.02
CACNB1-206ENST00000539338 MAFGO15525 162 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 IL18RAPO95256 599 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 MAP3K6O95382 1288 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 ESRRBO95718 433 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 GLI1P08151 1106 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 PSMC6P62333 389 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 OVGP1Q12889 678 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 ASIC4Q96FT7 647 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 PRMT6Q96LA8 375 aaPredicted RBP15.16■□□□□ 0.02
CACNB1-206ENST00000539338 DDX50Q9BQ39 737 aaKnown RBP15.16■□□□□ 0.02
CACNB1-206ENST00000539338 COLEC11Q9BWP8 271 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 AIPL1Q9NZN9 384 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 RASSF10A6NK89 507 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 MAP3K13O43283 966 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 ITGB3P05106 788 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 CYP11B1P15538 503 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 DCAF4L1Q3SXM0 396 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 DCAF6Q58WW2 860 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 ATP8B4Q8TF62 1192 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 PTPRN2Q92932 1015 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 EML4Q9HC35 981 aaKnown RBP15.16■□□□□ 0.02
CACNB1-206ENST00000539338 SLC13A4Q9UKG4 626 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 PRRG1O14668 218 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 DNAJC6O75061 913 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 LRG1P02750 347 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 ICAM1P05362 532 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 SARSP49591 514 aaKnown RBP15.16■□□□□ 0.02
CACNB1-206ENST00000539338 KRT33BQ14525 404 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 MAPRE2Q15555 327 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 SLC30A10Q6XR72 485 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 SPATA2LQ8IUW3 424 aaPredicted RBP15.16■□□□□ 0.02
CACNB1-206ENST00000539338 HPDLQ96IR7 371 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 ELMO2Q96JJ3 720 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 CEP19Q96LK0 163 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 SERPINB12Q96P63 405 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 IL17RBQ9NRM6 502 aa15.16■□□□□ 0.02
CACNB1-206ENST00000539338 LSM7Q9UK45 103 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms