RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 SAGE1Q9NXZ1 904 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 SCAF8Q9UPN6 1271 aaKnown RBP3.75□□□□□ -1.81
SNHG1-210ENST00000539303 SORCS3Q9UPU3 1222 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 MAP3K2Q9Y2U5 619 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 CHST2Q9Y4C5 530 aa3.75□□□□□ -1.81
SNHG1-210ENST00000539303 CCDC195A0A1B0GUA6 201 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 CLCA1A8K7I4 914 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 ACKR2O00590 384 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 TOR1BO14657 336 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 PIP5K1BO14986 540 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 RRP9O43818 475 aaKnown RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 WDHD1O75717 1129 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 FGAP02671 866 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 SPATA31D3P0C874 917 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 PECAM1P16284 738 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 HIBADHP31937 336 aaKnown RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 VIPR2P41587 438 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 GCLCP48506 637 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 PTDSS1P48651 473 aaKnown RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 KRT17Q04695 432 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 BLMHQ13867 455 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 RAPGEF1Q13905 1077 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 SLC29A2Q14542 456 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 RRP1BQ14684 758 aaKnown RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 IQCB1Q15051 598 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 NPY5RQ15761 445 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 AMOTQ4VCS5 1084 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 PLAG1Q6DJT9 500 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 PGBD2Q6P3X8 592 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 TLDC1Q6P9B6 456 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 FBXO38Q6PIJ6 1188 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 GLB1LQ6UWU2 654 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 MAMDC4Q6UXC1 1216 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 TMEM108Q6UXF1 575 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 SPATA31D4Q6ZUB0 917 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 HTR3DQ70Z44 454 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 BEND5Q7L4P6 421 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 TMPRSS9Q7Z410 1059 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 GAS2L3Q86XJ1 694 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 YAF2Q8IY57 180 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 GSPT2Q8IYD1 628 aaKnown RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.74□□□□□ -1.812e-11■■■■■ 65.7
SNHG1-210ENST00000539303 POC1BQ8TC44 478 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 CCT6BQ92526 530 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 PPP1R9BQ96SB3 815 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 RBM15Q96T37 977 aaKnown RBP eCLIP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 PNKPQ96T60 521 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 RMDN3Q96TC7 470 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 SORBS1Q9BX66 1292 aaKnown RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 KRTAP4-8Q9BYQ9 185 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 MAGEH1Q9H213 219 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 CXorf36Q9H7Y0 433 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 RGL1Q9NZL6 768 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 TRPM5Q9NZQ8 1165 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 DNMT3BQ9UBC3 853 aaKnown RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 EIF2B4Q9UI10 523 aaKnown RBP3.74□□□□□ -1.81
SNHG1-210ENST00000539303 ST6GALNAC2Q9UJ37 374 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 CLCA2Q9UQC9 943 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 GPR52Q9Y2T5 361 aa3.74□□□□□ -1.81
SNHG1-210ENST00000539303 XDHP47989 1333 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 A0A0G2JLL6 359 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-210ENST00000539303 LOC102723971A0A1B0GUV8 181 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 AREL1O15033 823 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 FAM20BO75063 409 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 ZNF623O75123 536 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 SKAP2O75563 359 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-210ENST00000539303 RPS6KA4O75676 772 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 SCAF4O95104 1147 aaKnown RBP3.73□□□□□ -1.81
SNHG1-210ENST00000539303 GPANK1O95872 356 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 LMNAP02545 664 aaKnown RBP3.73□□□□□ -1.81
SNHG1-210ENST00000539303 ERBB2P04626 1255 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 ZFP36P26651 326 aaKnown RBP3.73□□□□□ -1.81
SNHG1-210ENST00000539303 GRK6P43250 576 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 MAN2A2P49641 1150 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 CPT1AP50416 773 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 WNT3P56703 355 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 MXRA7P84157 204 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 SP2Q02086 613 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 PIGFQ07326 219 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 ZNF844Q08AG5 666 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 GRM1Q13255 1194 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 ARHGEF7Q14155 803 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 SPARCL1Q14515 664 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 POSTNQ15063 836 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 GEN1Q17RS7 908 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 ZACNQ401N2 412 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 TMTC4Q5T4D3 741 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 ZFYVE27Q5T4F4 411 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 VPS53Q5VIR6 699 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 CACHD1Q5VU97 1274 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 B3GNTL1Q67FW5 361 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-210ENST00000539303 NAIF1Q69YI7 327 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-210ENST00000539303 JMJD6Q6NYC1 403 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-210ENST00000539303 ZNF585AQ6P3V2 769 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 KIAA0408Q6ZU52 694 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 MAPKAPK5Q8IW41 473 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 CPXCR1Q8N123 301 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 ANKRD35Q8N283 1001 aa3.73□□□□□ -1.81
SNHG1-210ENST00000539303 OR1N1Q8NGS0 311 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms