RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 DGKKQ5KSL6 1271 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 MIS18BP1Q6P0N0 1132 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 DHX57Q6P158 1386 aaKnown RBP2.55□□□□□ -2
CBX3P4-201ENST00000538909 CATSPERGQ6ZRH7 1159 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 XIRP1Q702N8 1843 aaKnown RBP2.55□□□□□ -2
CBX3P4-201ENST00000538909 MRPL10Q7Z7H8 261 aaKnown RBP2.55□□□□□ -2
CBX3P4-201ENST00000538909 ASXL1Q8IXJ9 1541 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 PNLDC1Q8NA58 520 aaKnown RBP2.55□□□□□ -2
CBX3P4-201ENST00000538909 FANCBQ8NB91 859 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 RFKQ969G6 155 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 EAF2Q96CJ1 260 aaPredicted RBP2.55□□□□□ -2
CBX3P4-201ENST00000538909 LYZL4Q96KX0 146 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 NOTCH4Q99466 2003 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 SPTLC3Q9NUV7 552 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 TMEM140Q9NV12 185 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 KLHL13Q9P2N7 655 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 SETBP1Q9Y6X0 1596 aa2.55□□□□□ -2
CBX3P4-201ENST00000538909 KNDC1Q76NI1 1749 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 XRN1Q8IZH2 1706 aaKnown RBP2.54□□□□□ -2
CBX3P4-201ENST00000538909 KIAA1210Q9ULL0 1709 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 IQGAP1P46940 1657 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 ALKQ9UM73 1620 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 ADGRB1O14514 1584 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 DIP2AQ14689 1571 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 MYOM2P54296 1465 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 ZFXP17010 805 aaPredicted RBP2.54□□□□□ -2
CBX3P4-201ENST00000538909 SLC29A4Q7RTT9 530 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 JMYQ8N9B5 988 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 UBE2Q2Q8WVN8 375 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 WBP1Q96G27 269 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 THOC3Q96J01 351 aaKnown RBP2.54□□□□□ -2
CBX3P4-201ENST00000538909 VCPIP1Q96JH7 1222 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 SRPK1Q96SB4 655 aaKnown RBP2.54□□□□□ -2
CBX3P4-201ENST00000538909 RRP7BPQ9NSQ0 103 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 CTTNBP2NLQ9P2B4 639 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 DKK3Q9UBP4 350 aa2.54□□□□□ -2
CBX3P4-201ENST00000538909 CHD2O14647 1828 aaKnown RBP2.54□□□□□ -2
CBX3P4-201ENST00000538909 LTBP4Q8N2S1 1624 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 PIK3C2GO75747 1445 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 ADAMTS13Q76LX8 1427 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 FAM90A8PA6NJQ4 464 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 E5RJQ4 531 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 ZNF213O14771 459 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 KIF3BO15066 747 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 TEX33O43247 280 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 BCAR3O75815 825 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 SUN1O94901 812 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 OAZ2O95190 189 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 FGBP02675 491 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 FAM90A13PP0C7W8 464 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 FAM90A24PP0C7X0 464 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 TNFRSF1BP20333 461 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 ANXA11P50995 505 aaKnown RBP2.53□□□□□ -2
CBX3P4-201ENST00000538909 ZNF844Q08AG5 666 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 SERINC3Q13530 473 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 FAM50AQ14320 339 aaKnown RBP2.53□□□□□ -2
CBX3P4-201ENST00000538909 UGT8Q16880 541 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 TRIM71Q2Q1W2 868 aaKnown RBP2.53□□□□□ -2
CBX3P4-201ENST00000538909 PLAC9Q5JTB6 97 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 UBAP2Q5T6F2 1119 aaKnown RBP2.53□□□□□ -2
CBX3P4-201ENST00000538909 DHX37Q8IY37 1157 aaKnown RBP2.53□□□□□ -2
CBX3P4-201ENST00000538909 FKBP10Q96AY3 582 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 FOXP1Q9H334 677 aaPredicted RBP2.53□□□□□ -2
CBX3P4-201ENST00000538909 DMRT3Q9NQL9 472 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 NOC2LQ9Y3T9 749 aaKnown RBP2.53□□□□□ -2
CBX3P4-201ENST00000538909 LAMC1P11047 1609 aa2.53□□□□□ -2
CBX3P4-201ENST00000538909 TECPR2O15040 1411 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 UHRF1BP1Q6BDS2 1440 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 NUP155O75694 1391 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 TNRQ92752 1358 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 WDR17Q8IZU2 1322 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 ZBTB7CA1YPR0 619 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 H3BNX3 289 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 MYO1FO00160 1098 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 ADAM10O14672 748 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 ADAMTS3O15072 1205 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 SMAD6O43541 496 aaKnown RBP2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 GPR32O75388 356 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 AGFG2O95081 481 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 FAM163BP0C2L3 166 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 TMEM191BP0C7N4 346 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 PRF1P14222 555 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 JUPP14923 745 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 NPTX2P47972 431 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 CREMQ03060 361 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 RBMS2Q15434 407 aaKnown RBP2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 ZNF585BQ52M93 769 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 TAF7LQ5H9L4 462 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 BROXQ5VW32 411 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 FBXL22Q6P050 247 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 FAM180AQ6UWF9 173 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 C9orf47Q6ZRZ4 202 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 C18orf65Q6ZTR6 163 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 ZNF551Q7Z340 670 aaPredicted RBP2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 CHSY1Q86X52 802 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 KIF18BQ86Y91 864 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 C8orf58Q8NAV2 365 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 SMC1BQ8NDV3 1235 aa2.52□□□□□ -2.01
CBX3P4-201ENST00000538909 CCHCR1Q8TD31 782 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms